Evidence map›Paper›PMID 29603257›Full record

ArticleJournal of medical primatology2018

The non-human primate kidney transcriptome in fetal development.

Kimberly D Spradling-Reeves, Jeremy P Glenn, Kenneth J Lange, Natalia Kuhn, Jacqueline J Coalson, Mark J Nijland, Cun Li, Peter W Nathanielsz, Laura A Cox

Abstract read
In one paragraph

Article in Journal of medical primatology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.1field-weighted citation impact, top 53% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 12 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Prime time for primate functional genomics.Current opinion in genetics & development · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 1 country.

Kimberly D Spradling-ReevesDepartment of Internal Medicine, Wake Forest University Health Sciences, Winston-Salem, NC, USA.
Jeremy P GlennDepartment of Genetics, Texas Biomedical Research Institute, San Antonio, TX, USA.
Kenneth J LangePharmaceuticals and Bioengineering Department, Southwest Research Institute, San Antonio, TX, USA.
Natalia KuhnDepartment of Genetics, Texas Biomedical Research Institute, San Antonio, TX, USA.
Jacqueline J CoalsonDepartment of Pathology, University of Texas Health Science Center, San Antonio, TX, USA.
Mark J NijlandDepartment of Obstetrics and Gynecology, University of Texas Health Science Center, San Antonio, TX, USA.
Cun LiDepartment of Animal Science, University of Wyoming, Laramie, WY, USA.
Peter W NathanielszDepartment of Animal Science, University of Wyoming, Laramie, WY, USA.
Laura A CoxDepartment of Internal Medicine, Wake Forest University Health Sciences, Winston-Salem, NC, USA.ORCID 0000-0002-8836-3783
Texas Biomedical Research Institute · USThe University of Texas Health Science Center at San Antonio · USUniversity of Wyoming · USSouthwest Research Institute · USWake Forest University · US

Funding

The Southwest National Primate Research Center Supplement- Infrastructure improvements of ABSL2 holding areasP51OD011133 · OD · TEXAS BIOMEDICAL RESEARCH INSTITUTE · PI Larry S. Schlesinger · 2012 to 2026
$129.7M
PARTURITION AND FETAL PRIMATE HYPOTHALAMIC FUNCTIONP01HD021350 · NICHD · UNIVERSITY OF WYOMING · PI COX, LAURA A · 1987 to 2018
$19.9M
EXTRAMULAR RESEARCH FACILITIES CONSTRUCTIONC06RR017515 · NCRR · SOUTHWEST FOUNDATION FOR BIOMEDICAL RES · PI SHADE, ROBERT E · 2003 to 2003
$3.1M
MOLECULAR AND BIOCHEMICAL GENETICS LABORATORY RENOVATIONC06RR013556 · NCRR · SOUTHWEST FOUNDATION FOR BIOMEDICAL RES · PI SHADE, ROBERT E · 1998 to 1998
–
NCRR NIH HHS C06 RR013556NCRR NIH HHS C06 RR017515NICHD NIH HHS P01 HD021350NIH HHS P51 OD011133
6 · The paper itself

Abstract

backgroundLittle is known about the repertoire of non-human primate kidney genes expressed throughout development. The present work establishes an understanding of the primate renal transcriptome during fetal development in the context of renal maturation.

methodsThe baboon kidney transcriptome was characterized at 60-day gestation (DG), 90 DG, 125 DG, 140 DG, 160 DG and adulthood (6-12 years) using gene arrays and validated by QRT-PCR. Pathway and cluster analyses were used to characterize gene expression in the context of biological pathways.

resultsPathway analysis indicated activation of pathways not previously reported as relevant to kidney development. Cluster analysis also revealed gene splice variants with discordant expression profiles during development.

conclusionsThis study provides the first detailed genetic analysis of the developing primate kidney, and our findings of discordant expression of gene splice variants suggest that gene arrays likely provide a simplified view and demonstrate the need to study the fetal renal proteome.

Indexed as

TranscriptomeAnimalsFetal DevelopmentKidneyPapio hamadryasRNA, MessengerRNA, Messengerarraybabooncluster analysisgene expressionontogenypathway analysis

Identifiers

PMID29603257
PMCPMC5963710
OpenAlexW2795341583

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.