Evidence map›Paper›PMID 29602742›Full record

ArticleMolecular cell2018

Cas4-Dependent Prespacer Processing Ensures High-Fidelity Programming of CRISPR Arrays.

Hayun Lee, Yi Zhou, David W Taylor, Dipali G Sashital

Open access · bronzeAbstract read
In one paragraph

Article in Molecular cell, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 73 papers.

0numbers the graph read from it
0cells of the map it votes in
73citing papers in PubMed
6.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

73 citing papers in PubMed, 113 citations in OpenAlex.

  1. Article
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  7. Review
  8. Emerging tools in plant genome editing.Frontiers in genome editing · 2025
    Review
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13 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Hayun LeeRoy J. Carver Department of Biochemistry, Biophysics, and Molecular Biology, Iowa State University, Ames, IA, USA.
Yi ZhouDepartment of Molecular Biosciences, University of Texas at Austin, Austin, TX, USA.
David W TaylorDepartment of Molecular Biosciences, University of Texas at Austin, Austin, TX, USA; Institute for Cellular and Molecular Biology, University of Texas at Austin, Austin, TX, USA; Center for Systems and Synthetic Biology, University of Texas at Austin, Austin, TX, USA.
Dipali G SashitalRoy J. Carver Department of Biochemistry, Biophysics, and Molecular Biology, Iowa State University, Ames, IA, USA. Electronic address: sashital@iastate.edu.
Iowa State University · USThe University of Texas at Austin · US

Funding

Defining CRISPR adaptation and interference mechanisms in E. coliR01GM115874 · NIGMS · IOWA STATE UNIVERSITY · PI SASHITAL, DIPALI GURUDUTT · 2016 to 2021
$1.5M
NIGMS NIH HHS R01 GM115874
6 · The paper itself

Abstract

CRISPR-Cas immune systems integrate short segments of foreign DNA as spacers into the host CRISPR locus to provide molecular memory of infection. Cas4 proteins are widespread in CRISPR-Cas systems and are thought to participate in spacer acquisition, although their exact function remains unknown. Here we show that Bacillus halodurans type I-C Cas4 is required for efficient prespacer processing prior to Cas1-Cas2-mediated integration. Cas4 interacts tightly with the Cas1 integrase, forming a heterohexameric complex containing two Cas1 dimers and two Cas4 subunits. In the presence of Cas1 and Cas2, Cas4 processes double-stranded substrates with long 3' overhangs through site-specific endonucleolytic cleavage. Cas4 recognizes PAM sequences within the prespacer and prevents integration of unprocessed prespacers, ensuring that only functional spacers will be integrated into the CRISPR array. Our results reveal the critical role of Cas4 in maintaining fidelity during CRISPR adaptation, providing a structural and mechanistic model for prespacer processing and integration.

Indexed as

Clustered Regularly Interspaced Short Palindromic RepeatsCRISPR-Cas SystemsCRISPR-Associated Protein 9CRISPR-Associated ProteinsDNA, BacterialEndodeoxyribonucleasesEscherichia coliEscherichia coli ProteinsGene EditingModels, MolecularMultienzyme ComplexesNucleic Acid ConformationProtein ConformationProtein SubunitsSubstrate SpecificityCRISPR-Associated Protein 9CRISPR-Associated ProteinsDNA, BacterialEndodeoxyribonucleasesEscherichia coli ProteinsMultienzyme ComplexesProtein SubunitsYgbT protein, E coliCas1-Cas2Cas4CRISPR-CasDNA cleavageDNA integrationnegative stain EM

Identifiers

PMID29602742
PMCPMC5889325
OpenAlexW2795314419

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.