Evidence map›Paper›PMID 29601592›Full record

ArticlePloS one2018

No significant regulation of bicoid mRNA by Pumilio or Nanos in the early Drosophila embryo.

Tammy H Wharton, Krystle J Nomie, Robin P Wharton

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.1field-weighted citation impact, top 54% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Tammy H WhartonDepartments of Molecular Genetics & Cancer Biology and Genetics, Center for RNA Biology Ohio State University Columbus, OH.
Krystle J NomieDepartment of Lymphoma/Myeloma MD Anderson Cancer Center Holcombe Blvd. Houston, TX.
Robin P WhartonDepartments of Molecular Genetics & Cancer Biology and Genetics, Center for RNA Biology Ohio State University Columbus, OH.
The Ohio State University · USThe University of Texas MD Anderson Cancer Center · US

Funding

Translational repressors in Drosophila developmentR01GM084376 · NIGMS · OHIO STATE UNIVERSITY · PI WHARTON, ROBIN P · 2010 to 2013
$1.2M
NIGMS NIH HHS R01 GM084376NIH HHS GM084376
6 · The paper itself

Abstract

Drosophila Pumilio (Pum) is a founding member of the conserved Puf domain class of RNA-binding translational regulators. Pum binds with high specificity, contacting eight nucleotides, one with each of the repeats in its RNA-binding domain. In general, Pum is thought to block translation in collaboration with Nanos (Nos), which exhibits no binding specificity in isolation but is recruited jointly to regulatory sequences containing a Pum binding site in the 3'-UTRs of target mRNAs. Unlike Pum, which is ubiquitous in the early embryo, Nos is tightly restricted to the posterior, ensuring that repression of its best-characterized target, maternal hunchback (hb) mRNA, takes place exclusively in the posterior. An exceptional case of Nos-independent regulation by Pum has been described-repression of maternal bicoid (bcd) mRNA at the anterior pole of the early embryo, dependent on both Pum and conserved Pum binding sites in the 3'-UTR of the mRNA. We have re-investigated regulation of bcd in the early embryo; our experiments reveal no evidence of a role for Pum or its conserved binding sites in regulation of the perdurance of bcd mRNA or protein. Instead, we find that Pum and Nos control the accumulation of bcd mRNA in testes.

Indexed as

Gene Expression Regulation, Developmental3' Untranslated RegionsAnimalsBase SequenceDrosophila melanogasterDrosophila ProteinsEmbryo, NonmammalianHomeodomain ProteinsMaleMutationRNA-Binding ProteinsTestisTrans-Activators3' Untranslated Regionsbcd protein, DrosophilaDrosophila ProteinsHomeodomain Proteinsnos protein, Drosophilapum protein, DrosophilaRNA-Binding ProteinsTrans-Activators

Identifiers

PMID29601592
PMCPMC5877865
OpenAlexW2794584441

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.