Evidence map›Paper›PMID 29601575›Full record

ArticlePLoS neglected tropical diseases2018

Discovery of genomic intervals that underlie nematode responses to benzimidazoles.

Mostafa Zamanian, Daniel E Cook, Stefan Zdraljevic, Shannon C Brady, Daehan Lee, Junho Lee, Erik C Andersen

Open access · goldAbstract read
In one paragraph

Article in PLoS neglected tropical diseases, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
11.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 76 citations in OpenAlex.

  1. bioRxiv : the preprint server for biology · 2026
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  5. Quantitative tests of albendazole resistance in beta-tubulin mutants.bioRxiv : the preprint server for biology · 2024
    Article
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  18. Anthelmintic Effect ofMolecules (Basel, Switzerland) · 2022
    Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Mostafa ZamanianDepartment of Pathobiological Sciences, University of Wisconsin-Madison, Madison, Wisconsin, United States of America.ORCID 0000-0001-9233-1760
Daniel E CookDepartment of Molecular Biosciences, Northwestern University, Evanston, Illinois, United States of America.ORCID 0000-0003-3347-562X
Stefan ZdraljevicDepartment of Molecular Biosciences, Northwestern University, Evanston, Illinois, United States of America.
Shannon C BradyDepartment of Molecular Biosciences, Northwestern University, Evanston, Illinois, United States of America.
Daehan LeeDepartment of Molecular Biosciences, Northwestern University, Evanston, Illinois, United States of America.
Junho LeeInstitute of Molecular Biology and Genetics, Department of Biological Sciences, Seoul National University, Seoul, Korea.
Erik C AndersenDepartment of Molecular Biosciences, Northwestern University, Evanston, Illinois, United States of America.
Northwestern University · USSeoul National University · KRUniversity of Wisconsin–Madison · US

Funding

CELLULAR &MOLECULAR BASIS OF DISEASE TRAINING PROGRAMT32GM008061 · NIGMS · NORTHWESTERN UNIVERSITY · PI CARTHEW, RICHARD W. · 1985 to 2022
$17.1M
Developing Capacity to Evaluate Training Programs via Development of Human, Institutional and Social CapitalT32GM008449 · NIGMS · NORTHWESTERN UNIVERSITY · PI LEONARD, JOSHUA NATHANIEL · 1993 to 2023
$7.8M
Discovery and validation of avermectin resistance loci in free-living and parasitic nematodesR21AI121836 · NIAID · NORTHWESTERN UNIVERSITY · PI ANDERSEN, ERIK CHRISTIAN · 2016 to 2017
$424k
Uncovering new mechanisms of nematode anthelmintic resistanceK22AI125473 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI ZAMANIAN, MOSTAFA · 2017 to 2018
$269k
NIAID NIH HHS K22 AI125473NIAID NIH HHS R21 AI121836NIGMS NIH HHS T32 GM008061NIGMS NIH HHS T32 GM008449NIH HHS R21AI121836
6 · The paper itself

Abstract

Parasitic nematodes impose a debilitating health and economic burden across much of the world. Nematode resistance to anthelmintic drugs threatens parasite control efforts in both human and veterinary medicine. Despite this threat, the genetic landscape of potential resistance mechanisms to these critical drugs remains largely unexplored. Here, we exploit natural variation in the model nematodes Caenorhabditis elegans and Caenorhabditis briggsae to discover quantitative trait loci (QTL) that control sensitivity to benzimidazoles widely used in human and animal medicine. High-throughput phenotyping of albendazole, fenbendazole, mebendazole, and thiabendazole responses in panels of recombinant lines led to the discovery of over 15 QTL in C. elegans and four QTL in C. briggsae associated with divergent responses to these anthelmintics. Many of these QTL are conserved across benzimidazole derivatives, but others show drug and dose specificity. We used near-isogenic lines to recapitulate and narrow the C. elegans albendazole QTL of largest effect and identified candidate variants correlated with the resistance phenotype. These QTL do not overlap with known benzimidazole target resistance genes from parasitic nematodes and present specific new leads for the discovery of novel mechanisms of nematode benzimidazole resistance. Analyses of orthologous genes reveal conservation of candidate benzimidazole resistance genes in medically important parasitic nematodes. These data provide a basis for extending these approaches to other anthelmintic drug classes and a pathway towards validating new markers for anthelmintic resistance that can be deployed to improve parasite disease control.

Indexed as

Drug ResistanceQuantitative Trait LociAlbendazoleAnimalsAnthelminticsAntinematodal AgentsBenzimidazolesCaenorhabditisCaenorhabditis elegansFenbendazoleGenome, HelminthGenomicsHumansNematodaNematode InfectionsPhenotypeAlbendazoleAnthelminticsAntinematodal AgentsbenzimidazoleBenzimidazolesFenbendazole

Identifiers

PMID29601575
PMCPMC5895046
OpenAlexW2794912905

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.