Evidence map›Paper›PMID 29596494›Full record

ArticlePloS one2018

High rates of chronic HBV genotype E infection in a group of migrants in Italy from West Africa: Virological characteristics associated with poor immune clearance.

Vincenzo Malagnino, Romina Salpini, Gaetano Maffongelli, Arianna Battisti, Lavinia Fabeni, Lorenzo Piermatteo, Luna Colagrossi, Vanessa Fini, Alessandra Ricciardi, Cesare Sarrecchia and 4 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 21 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 1 institution in 1 country.

Vincenzo MalagninoClinical Infectious Diseases, Department of System Medicine, Tor Vergata University, Rome, Italy.
Romina SalpiniDepartment of Experimental Medicine and Surgery, Tor Vergata University, Rome, Italy.
Gaetano MaffongelliClinical Infectious Diseases, Department of System Medicine, Tor Vergata University, Rome, Italy.
Arianna BattistiDepartment of Experimental Medicine and Surgery, Tor Vergata University, Rome, Italy.
Lavinia FabeniDepartment of Experimental Medicine and Surgery, Tor Vergata University, Rome, Italy.
Lorenzo PiermatteoDepartment of Experimental Medicine and Surgery, Tor Vergata University, Rome, Italy.
Luna ColagrossiDepartment of Experimental Medicine and Surgery, Tor Vergata University, Rome, Italy.
Vanessa FiniDepartment of Experimental Medicine and Surgery, Tor Vergata University, Rome, Italy.
Alessandra RicciardiClinical Infectious Diseases, Department of System Medicine, Tor Vergata University, Rome, Italy.
Cesare SarrecchiaClinical Infectious Diseases, Department of System Medicine, Tor Vergata University, Rome, Italy.
Carlo Federico PernoDepartment of Experimental Medicine and Surgery, Tor Vergata University, Rome, Italy.
Massimo AndreoniClinical Infectious Diseases, Department of System Medicine, Tor Vergata University, Rome, Italy.
Valentina SvicherDepartment of Experimental Medicine and Surgery, Tor Vergata University, Rome, Italy.
Loredana SarmatiClinical Infectious Diseases, Department of System Medicine, Tor Vergata University, Rome, Italy.ORCID 0000-0003-1452-0333
University of Rome Tor Vergata · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hepatitis B virus (HBV) genotype E almost exclusively occurs in African people, and its presence is more commonly associated with the development of chronic HBV (CHB) infection. Moreover, an epidemiological link has been found between the distribution of HBV genotype E infection and African countries with high incidences of hepatocellular carcinoma. As part of a programme for the health assessment of migrants, we evaluated 358 young African subjects for HBV infection; 58.1% (208/358) were positive for an HBV marker, and 54 (25.5%) had CHB. Eighty-one percent of the CHB subjects were infected with HBV genotype E, with a median serum HBV-DNA of 3.2 (IQR: 2.7-3.6) logIU/ml. All patients had high serum HBsAg titres (10,899 [range 5,359-20,272] IU/ml), and no correlation was found between HBsAg titres and HBV-DNA plasma levels. RT sequence analysis showed the presence of a number of immune escape mutations: strains from all of the patients had a serine at HBsAg position 140; 3 also had T116N, Y100C, and P142L+S143L substitutions; and 1 had a G112R substitution. Six (18%) patients had stop-codons at position 216. In 5 of the 9 (26.5%) CHB patients, ultrasound liver biopsy, quantification of total intrahepatic HBV-DNA and cccDNA, and RT/HBsAg sequencing were performed. The median (IQR) total intrahepatic HBV-DNA was 766 (753-1139) copies/1000 cells, and the median (IQR) cccDNA was 17 (10-27) copies/1000 cells. Correlations were observed for both total intrahepatic HBV-DNA and cccDNA with serum HBV-DNA, while no correlation was found for the HBsAg titres. A difference of 2.5/1,000 nucleotides was found in the HBsAg sequences obtained from plasma and from liver tissue, with 3 cases of possible viral anatomical compartmentalization. In conclusion, a high rate of CHB infection due to the E genotype was demonstrated in a group of immigrants from Western Africa. An analysis of the viral strains obtained showed the virological characteristics of immune escape, which may be the cause of viral replication persistence. Moreover, a fair percentage of stop codon mutations were found. The lack of correlation between HBsAg titres and plasma or intrahepatic HBV-DNA found in these subjects suggests a pathway of virus production that is not linked to HBsAg secretion. Studies with a larger number of patients with CHB due to the E genotype are advisable to corroborate these observations.

Indexed as

Emigration and ImmigrationGenotypeAdultAfricaFemaleHepatitis B, ChronicHepatitis B virusHumansItalyMaleMiddle AgedYoung Adult

Identifiers

PMID29596494
PMCPMC5875859
OpenAlexW2794779284

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.