Evidence map›Paper›PMID 29595810›Full record

ArticleGenetics in medicine : official journal of the American College of Medical Genetics2018

Genotype and phenotype correlation in von Hippel-Lindau disease based on alteration of the HIF-α binding site in VHL protein.

Sheng-Jie Liu, Jiang-Yi Wang, Shuang-He Peng, Teng Li, Xiang-Hui Ning, Bao-An Hong, Jia-Yuan Liu, Peng-Jie Wu, Bo-Wen Zhou, Jing-Cheng Zhou and 6 more

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Article in Genetics in medicine : official journal of the American College of Medical Genetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
1.7field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 55 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 2 institutions in 1 country.

Sheng-Jie LiuDepartment of Urology, Peking University First Hospital, Beijing, P.R. China.
Jiang-Yi WangDepartment of Urology, Peking University First Hospital, Beijing, P.R. China.
Shuang-He PengDepartment of Urology, Peking University First Hospital, Beijing, P.R. China.
Teng LiDepartment of Urology, Peking University First Hospital, Beijing, P.R. China.
Xiang-Hui NingDepartment of Urology, Peking University First Hospital, Beijing, P.R. China.
Bao-An HongDepartment of Urology, Peking University First Hospital, Beijing, P.R. China.
Jia-Yuan LiuDepartment of Urology, Peking University First Hospital, Beijing, P.R. China.
Peng-Jie WuDepartment of Urology, Beijing Hospital, Beijing, P.R. China.
Bo-Wen ZhouDepartment of Urology, Peking University First Hospital, Beijing, P.R. China.
Jing-Cheng ZhouDepartment of Urology, Peking University First Hospital, Beijing, P.R. China.
Nie-Nie QiDepartment of Urology, Peking University First Hospital, Beijing, P.R. China.
Xiang PengDepartment of Urology, Peking University First Hospital, Beijing, P.R. China.
Jiu-Feng ZhangDepartment of Urology, Peking University First Hospital, Beijing, P.R. China.
Kai-Fang MaDepartment of Urology, Peking University First Hospital, Beijing, P.R. China.
Lin CaiDepartment of Urology, Peking University First Hospital, Beijing, P.R. China. drcailin@163.com.
Kan GongDepartment of Urology, Peking University First Hospital, Beijing, P.R. China. drcailin@163.com.
Peking University · CNPeking University First Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeVon Hippel-Lindau (VHL) disease is a rare hereditary cancer syndrome that reduces life expectancy. We aimed to construct a more valuable genotype-phenotype correlation based on alterations in VHL protein (pVHL).

methodsVHL patients (n = 339) were recruited and grouped based on mutation types: HIF-α binding site missense (HM) mutations, non-HIF-α binding site missense (nHM) mutations, and truncating (TR) mutations. Age-related risks of VHL-associated tumors and patient survival were compared.

resultsMissense mutations conferred an increased risk of pheochromocytoma (HR = 1.854, p = 0.047) compared with truncating mutations. The risk of pheochromocytoma was lower in the HM group than in the nHM group (HR = 0.298, p = 0.003) but was similar between HM and TR groups (HR = 0.901, p = 0.810). Patients in the nHM group had a higher risk of pheochromocytoma (HR = 3.447, p < 0.001) and lower risks of central nervous system hemangioblastoma (CHB) (HR = 0.700, p = 0.045), renal cell carcinoma (HR = 0.610, p = 0.024), and pancreatic tumor (HR = 0.382, p < 0.001) than those in the combined HM and TR (HMTR) group. Moreover, nHM mutations were independently associated with better overall survival (HR = 0.345, p = 0.005) and CHB-specific survival (HR = 0.129, p = 0.005) than HMTR mutations.

conclusionThe modified genotype-phenotype correlation links VHL gene mutation, substrate binding site, and phenotypic diversity (penetrance and survival), and provides more accurate information for genetic counseling and pathogenesis studies.

Indexed as

AdultAgedAged, 80 and overBinding SitesCarcinoma, Renal CellFemaleGenetic Association StudiesHumansHypoxia-Inducible Factor 1, alpha SubunitMaleMiddle AgedMutation, MissenseProtein Bindingvon Hippel-Lindau DiseaseVon Hippel-Lindau Tumor Suppressor ProteinHIF1A protein, humanHypoxia-Inducible Factor 1, alpha SubunitVHL protein, humanVon Hippel-Lindau Tumor Suppressor Proteingenotype–phenotypeprotein binding sitesurvivaltumor riskvon Hippel–Lindau disease

Identifiers

PMID29595810
OpenAlexW2794577641

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.