Evidence map›Paper›PMID 29594187›Full record

ArticleBio-protocol2017

Biochemical Isolation of Myonuclei from Mouse Skeletal Muscle Tissue.

Alicia A Cutler, Anita H Corbett, Grace K Pavlath

Abstract read
In one paragraph

Article in Bio-protocol, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Alicia A CutlerBiology Department, Emory University, Atlanta, USA.
Anita H CorbettBiology Department, Emory University, Atlanta, USA.
Grace K PavlathPharmacology Department, Emory University, Atlanta, USA.

Funding

Training Program in Biochemistry, Cell and Molecular BiologyT32GM008367 · NIGMS · EMORY UNIVERSITY · PI BOISE, LAWRENCE H., CORBETT, ANITA H. · 1990 to 2019
$5.6M
Nucleocytoplasmic Transport in Skeletal MuscleR01AR062483 · NIAMS · EMORY UNIVERSITY · PI PAVLATH, GRACE K · 2012 to 2016
$1.7M
Interplay between nuclear import and transcriptional activity during myogenesisF31AR067645 · NIAMS · EMORY UNIVERSITY · PI CUTLER, ALICIA A · 2015 to 2017
$128k
NIAMS NIH HHS F31 AR067645NIAMS NIH HHS R01 AR062483NIGMS NIH HHS T32 GM008367
6 · The paper itself

Abstract

Skeletal muscle provides the contractile force necessary for movement, swallowing, and breathing and, consequently, is necessary for survival. Skeletal muscle cells are unique in that they are extremely large cells containing thousands of nuclei. These nuclei must all work in concert to maintain skeletal muscle function and thereby maintain life. The nucleus is a major site of signaling integration and gene expression regulation. However, examining nuclear processes in skeletal muscle can be difficult because myonuclei are challenging to isolate. We optimized a protocol to purify myonuclei from whole muscle tissue using ultracentrifugation over a discontinuous sucrose gradient to separate the nuclear fraction. We used these purified nuclei for downstream applications including flow cytometry and mass spectrometry. We used this method to compare the myonuclear proteome of young and old mouse hindlimb muscles (Cutler

Indexed as

FractionationMagnetic isolationSucrose gradientUltracentrifugation

Identifiers

PMID29594187
PMCPMC5868967

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.