Evidence map›Paper›PMID 29593033›Full record

ArticleJournal of virology2018

Human Group C Rotavirus VP8*s Recognize Type A Histo-Blood Group Antigens as Ligands.

Xiaoman Sun, Lihong Wang, Jianxun Qi, Dandi Li, Mengxuan Wang, Xin Cong, Ruchao Peng, Wengang Chai, Qing Zhang, Hong Wang and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
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  8. Article
  9. Structural Basis of Glycan Recognition of Rotavirus.Frontiers in molecular biosciences · 2021
    Review
  10. Review
  11. Article
  12. Article
  13. Review
  14. Article
  15. Virus recognition of glycan receptors.Current opinion in virology · 2019
    Review
  16. Review
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 8 institutions in 3 countries.

Xiaoman Sun *Key Laboratory of Medical Virology and Viral Diseases, Ministry of Health of the People's Republic of China, Beijing, China.
Lihong Wang *Department of Virology, School of Public Health, Shandong University, Jinan, China.
Jianxun Qi *CAS Key Laboratory of Pathogenic Microbiology and Immunology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China.
Dandi Li *Key Laboratory of Medical Virology and Viral Diseases, Ministry of Health of the People's Republic of China, Beijing, China.
Mengxuan WangKey Laboratory of Medical Virology and Viral Diseases, Ministry of Health of the People's Republic of China, Beijing, China.
Xin CongKey Laboratory of Medical Virology and Viral Diseases, Ministry of Health of the People's Republic of China, Beijing, China.
Ruchao PengCAS Key Laboratory of Pathogenic Microbiology and Immunology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China.
Wengang ChaiGlycosciences Laboratory, Department of Medicine, Imperial College London, London, United Kingdom.
Qing ZhangKey Laboratory of Medical Virology and Viral Diseases, Ministry of Health of the People's Republic of China, Beijing, China.
Hong WangKey Laboratory of Medical Virology and Viral Diseases, Ministry of Health of the People's Republic of China, Beijing, China.
Hongling WenDepartment of Virology, School of Public Health, Shandong University, Jinan, China.
George F GaoNational Institute for Viral Disease Control and Prevention, China CDC, Beijing, China.
Ming TanDivision of Infectious Diseases, University of Cincinnati College of Medicine, Cincinnati, Ohio, USA.
Zhaojun DuanKey Laboratory of Medical Virology and Viral Diseases, Ministry of Health of the People's Republic of China, Beijing, China zhaojund@126.com.
National Health and Family Planning Commission · CNNational Institute for Viral Disease Control and Prevention · CNChinese Center For Disease Control and Prevention · CNShandong University · CNChinese Academy of Sciences · CNImperial College London · GBInstitute of Microbiology · CNUniversity of Cincinnati Medical Center · US

Funding

Overall Priority Score P41GM103694 · NIGMS · EMORY UNIVERSITY · PI CUMMINGS, RICHARD D · 2013 to 2018
$6.9M
Protein-Glycan Interaction Resource of the CFGR24GM098791 · NIGMS · EMORY UNIVERSITY · PI CUMMINGS, RICHARD D, PAULSON, JAMES C · 2011 to 2013
$2.6M
NIGMS NIH HHS P41 GM103694NIGMS NIH HHS R24 GM098791
6 · The paper itself

Abstract

Group/species C rotaviruses (RVCs) have been identified as important pathogens of acute gastroenteritis (AGE) in children, family-based outbreaks, as well as animal infections. However, little is known regarding their host-specific interaction, infection, and pathogenesis. In this study, we performed serial studies to characterize the function and structural features of a human G4P[2] RVC VP8* that is responsible for the host receptor interaction. Glycan microarrays demonstrated that the human RVC VP8* recognizes type A histo-blood group antigens (HBGAs), which was confirmed by synthetic glycan-/saliva-based binding assays and hemagglutination of red blood cells, establishing a paradigm of RVC VP8*-glycan interactions. Furthermore, the high-resolution crystal structure of the human RVC VP8* was solved, showing a typical galectin-like structure consisting of two β-sheets but with significant differences from cogent proteins of group A rotaviruses (RVAs). The VP8* in complex with a type A trisaccharide displays a novel ligand binding site that consists of a particular set of amino acid residues of the C-D, G-H, and K-L loops. RVC VP8* interacts with type A HBGAs through a unique mechanism compared with that used by RVAs. Our findings shed light on the host-virus interaction and the coevolution of RVCs and will facilitate the development of specific antivirals and vaccines.

Indexed as

Virus AttachmentABO Blood-Group SystemAmino Acid SequenceAnimalsBinding SitesBlood Group AntigensCapsid ProteinsCrystallography, X-RayGastroenteritisHemagglutinationHost-Pathogen InteractionsHost SpecificityHumansOligosaccharidesOligosaccharides, Branched-ChainReceptors, VirusABO Blood-Group SystemBlood Group Antigensblood group A trisaccharideCapsid ProteinsNS35 protein, rotavirusOligosaccharidesOligosaccharides, Branched-ChainReceptors, VirusRNA-Binding ProteinsViral Nonstructural Proteinscrystal structuregroup/species C rotavirus (RVC)host factortype A HBGAvirus-glycan binding siteVP8* domain

Identifiers

PMID29593033
PMCPMC5952154
OpenAlexW2791624080

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.