Evidence map›Paper›PMID 29590179›Full record

ArticlePloS one2018

Influence of fast advective flows on pattern formation of Dictyostelium discoideum.

Torsten Eckstein, Estefania Vidal-Henriquez, Albert Bae, Vladimir Zykov, Eberhard Bodenschatz, Azam Gholami

Abstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Torsten EcksteinMax Planck Institute for Dynamics and Self-Organization, 37077, Göttingen, Germany.
Estefania Vidal-HenriquezMax Planck Institute for Dynamics and Self-Organization, 37077, Göttingen, Germany.
Albert BaeMax Planck Institute for Dynamics and Self-Organization, 37077, Göttingen, Germany.
Vladimir ZykovMax Planck Institute for Dynamics and Self-Organization, 37077, Göttingen, Germany.
Eberhard BodenschatzMax Planck Institute for Dynamics and Self-Organization, 37077, Göttingen, Germany.
Azam GholamiMax Planck Institute for Dynamics and Self-Organization, 37077, Göttingen, Germany.ORCID 0000-0002-9332-4551

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We report experimental and numerical results on pattern formation of self-organizing Dictyostelium discoideum cells in a microfluidic setup under a constant buffer flow. The external flow advects the signaling molecule cyclic adenosine monophosphate (cAMP) downstream, while the chemotactic cells attached to the solid substrate are not transported with the flow. At high flow velocities, elongated cAMP waves are formed that cover the whole length of the channel and propagate both parallel and perpendicular to the flow direction. While the wave period and transverse propagation velocity are constant, parallel wave velocity and the wave width increase linearly with the imposed flow. We also observe that the acquired wave shape is highly dependent on the wave generation site and the strength of the imposed flow. We compared the wave shape and velocity with numerical simulations performed using a reaction-diffusion model and found excellent agreement. These results are expected to play an important role in understanding the process of pattern formation and aggregation of D. discoideum that may experience fluid flows in its natural habitat.

Indexed as

ChemotaxisCell AggregationCyclic AMPDictyosteliumModels, BiologicalMorphogenesisCyclic AMP

Identifiers

PMID29590179
PMCPMC5874059

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.