Evidence map›Paper›PMID 29589097›Full record

ArticleActa neuropathologica2018

An intronic VNTR affects splicing of ABCA7 and increases risk of Alzheimer's disease.

Arne De Roeck, Lena Duchateau, Jasper Van Dongen, Rita Cacace, Maria Bjerke, Tobi Van den Bossche, Patrick Cras, Rik Vandenberghe, Peter P De Deyn, Sebastiaan Engelborghs and 3 more

Open access · hybridAbstract read
In one paragraph

Article in Acta neuropathologica, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 68 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
68citing papers in PubMed, 3 pooled it
4.0field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

68 citing papers in PubMed, 3 syntheses or guidelines pooled it, 100 citations in OpenAlex.

  1. Unlocking Implantation: The Role of Nitric Oxide, NOInternational journal of molecular sciences · 2025
    Pooled it
  2. Pooled it
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  4. Review
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  8. Long-read sequencing reveals genomic and epigenomic variation in the dark genome of human Alzheimer's disease.Alzheimer's & dementia : the journal of the Alzheimer's Association · 2025
    Article
  9. Structure of a polymorphic repeat at theProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  10. Article
  11. Structure of a polymorphic repeat at themedRxiv : the preprint server for health sciences · 2025
    Article
  12. Exploring potential mechanisms of an African protective locus for Alzheimer's disease in APOEε4 carriers.Alzheimer's & dementia : the journal of the Alzheimer's Association · 2025
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8 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 1 country.

Arne De RoeckNeurodegenerative Brain Diseases Group, VIB Center for Molecular Neurology, University of Antwerp-CDE, Universiteitsplein 1, 2610, Antwerp, Belgium.
Lena DuchateauNeurodegenerative Brain Diseases Group, VIB Center for Molecular Neurology, University of Antwerp-CDE, Universiteitsplein 1, 2610, Antwerp, Belgium.
Jasper Van DongenNeurodegenerative Brain Diseases Group, VIB Center for Molecular Neurology, University of Antwerp-CDE, Universiteitsplein 1, 2610, Antwerp, Belgium.
Rita CacaceNeurodegenerative Brain Diseases Group, VIB Center for Molecular Neurology, University of Antwerp-CDE, Universiteitsplein 1, 2610, Antwerp, Belgium.
Maria BjerkeReference Center for Biological Markers of Dementia (BIODEM), Laboratory of Neurochemistry and Behavior, Institute Born-Bunge, University of Antwerp (UAntwerp), Antwerp, Belgium.
Tobi Van den BosscheNeurodegenerative Brain Diseases Group, VIB Center for Molecular Neurology, University of Antwerp-CDE, Universiteitsplein 1, 2610, Antwerp, Belgium.
Patrick CrasDepartment of Neurology, Antwerp University Hospital, Edegem, Belgium.
Rik VandenbergheDepartment of Neurosciences, Faculty of Medicine, KU Leuven, Leuven, Belgium.
Peter P De DeynInstitute Born-Bunge, University of Antwerp, Antwerp, Belgium.
Sebastiaan EngelborghsReference Center for Biological Markers of Dementia (BIODEM), Laboratory of Neurochemistry and Behavior, Institute Born-Bunge, University of Antwerp (UAntwerp), Antwerp, Belgium.
Christine Van BroeckhovenNeurodegenerative Brain Diseases Group, VIB Center for Molecular Neurology, University of Antwerp-CDE, Universiteitsplein 1, 2610, Antwerp, Belgium.
Kristel SleegersNeurodegenerative Brain Diseases Group, VIB Center for Molecular Neurology, University of Antwerp-CDE, Universiteitsplein 1, 2610, Antwerp, Belgium. kristel.sleegers@molgen.vib-ua.be.ORCID http://orcid.org/0000-0002-0283-2332
BELNEU Consortium
University of Antwerp · BEAntwerp University Hospital · BEKU Leuven · BE

Funding

Alzheimer Research Foundation (SAO FRA) S#16031Fonds Wetenschappelijk Onderzoek 1S44216NFonds Wetenschappelijk Onderzoek G030718N
6 · The paper itself

Abstract

Mutations leading to premature termination codons in ATP-Binding Cassette Subfamily A Member 7 (ABCA7) are high penetrant risk factors of Alzheimer's disease (AD). The influence of other genetic variants in ABCA7 and downstream functional mechanisms, however, is poorly understood. To address this knowledge gap, we investigated tandem repetitive regions in ABCA7 in a Belgian cohort of 1529 AD patients and control individuals and identified an intronic variable number tandem repeat (VNTR). We observed strong association between VNTR length and a genome-wide associated signal for AD in the ABCA7 locus. Expanded VNTR alleles were highly enriched in AD patients [odds ratio = 4.5 (1.3-24.2)], and VNTR length inversely correlated with amyloid β

Indexed as

Minisatellite RepeatsAgedAged, 80 and overAlternative SplicingAlzheimer DiseaseATP-Binding Cassette TransportersBiomarkersBrainExonsFemaleGene ExpressionGenetic Association StudiesGenetic Predisposition to DiseaseHumansIntronsMaleABCA7 protein, humanATP-Binding Cassette TransportersBiomarkersProtein IsoformsAlternative splicingAlzheimer’s diseaseATP-Binding Cassette, Sub-Family A, Member 7 (ABCA7)Cerebrospinal fluid (CSF) biomarkersVariable number tandem repeat (VNTR)

Identifiers

PMID29589097
PMCPMC5954066
OpenAlexW2795221761

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.