Evidence map›Paper›PMID 29588478›Full record

ArticleNature communications2018

Ikaros family zinc finger 1 regulates dendritic cell development and function in humans.

Urszula Cytlak, Anastasia Resteu, Delfien Bogaert, Hye Sun Kuehn, Thomas Altmann, Andrew Gennery, Graham Jackson, Attila Kumanovics, Karl V Voelkerding, Seraina Prader and 7 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
4.2field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 80 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 7 institutions in 4 countries.

Urszula CytlakInstitute of Cellular Medicine, Newcastle University, Framlington Place, Newcastle upon Tyne, NE2 4HH, UK.ORCID http://orcid.org/0000-0002-2536-6012
Anastasia ResteuInstitute of Cellular Medicine, Newcastle University, Framlington Place, Newcastle upon Tyne, NE2 4HH, UK.
Delfien BogaertPrimary Immunodeficiency Research Lab, Department of Pulmonary Medicine, Ghent University Hospital, C. Heymanslaan 10, 9000, Ghent, Belgium.
Hye Sun KuehnDepartment of Laboratory Medicine NIH Clinical Center, National Institutes of Health, 10 Center Drive-MSC 1508, Bethesda, MD, 20892-1508, USA.
Thomas AltmannInstitute of Cellular Medicine, Newcastle University, Framlington Place, Newcastle upon Tyne, NE2 4HH, UK.
Andrew GenneryInstitute of Cellular Medicine, Newcastle University, Framlington Place, Newcastle upon Tyne, NE2 4HH, UK.
Graham JacksonNewcastle upon Tyne Hospitals NHS Foundation Trust, Freeman Road, Newcastle upon Tyne, NE7 7DN, UK.
Attila KumanovicsDepartment of Pathology, University of Utah, 50 North Medical Drive, Salt Lake City, UT, 84132, USA.
Karl V VoelkerdingDepartment of Pathology, University of Utah, 50 North Medical Drive, Salt Lake City, UT, 84132, USA.
Seraina PraderDivision of Immunology, University Children's Hospital Zurich, Steinwiesstrasse 75, 8032, Zurich, Switzerland.
Melissa DullaersPrimary Immunodeficiency Research Lab, Department of Pulmonary Medicine, Ghent University Hospital, C. Heymanslaan 10, 9000, Ghent, Belgium.ORCID http://orcid.org/0000-0003-0223-230X
Janine ReichenbachDivision of Immunology, University Children's Hospital Zurich, Steinwiesstrasse 75, 8032, Zurich, Switzerland.
Harry HillDepartment of Pathology, University of Utah, 50 North Medical Drive, Salt Lake City, UT, 84132, USA.
Filomeen HaerynckPrimary Immunodeficiency Research Lab, Department of Pulmonary Medicine, Ghent University Hospital, C. Heymanslaan 10, 9000, Ghent, Belgium.
Sergio D RosenzweigDepartment of Laboratory Medicine NIH Clinical Center, National Institutes of Health, 10 Center Drive-MSC 1508, Bethesda, MD, 20892-1508, USA.
Matthew CollinInstitute of Cellular Medicine, Newcastle University, Framlington Place, Newcastle upon Tyne, NE2 4HH, UK.
Venetia BigleyInstitute of Cellular Medicine, Newcastle University, Framlington Place, Newcastle upon Tyne, NE2 4HH, UK. venetia.bigley@ncl.ac.uk.ORCID http://orcid.org/0000-0002-3017-2474
Newcastle upon Tyne Hospitals NHS Foundation Trust · GBGhent University Hospital · BEUniversity of Utah · USNational Institutes of Health Clinical Center · USNewcastle University · GBUniversity Children's Hospital Zurich · CHZHAW Zurich University of Applied Sciences · CH

Funding

Studies of Inherited Causes of Fungal SusceptabilityZIAAI001122 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI ROSENZWEIG, SERGIO · 2010 to 2025
$26.0M
Elucidating the Genetic Basis of Common Variable Immune DeficiencyR21AI094004 · NIAID · UNIVERSITY OF UTAH · PI HILL, HARRY R, VOELKERDING, KARL · 2011 to 2012
$411k
Expanding the Genetic Basis of Common Variable ImmunodeficiencyR03AI113631 · NIAID · UNIVERSITY OF UTAH · PI KUMANOVICS, ATTILA · 2014 to 2015
$149k
Mutation Analysis Of Selected Lymphoid Immune DisordersZIACL010304 · CLC · CLINICAL CENTER · PI ROSENZWEIG, SERGIO · 2009 to 2025
$0k
NIAID NIH HHS R03 AI113631NIAID NIH HHS R21 AI094004Wellcome Trust
6 · The paper itself

Abstract

Ikaros family zinc finger 1 (IKZF1) is a haematopoietic transcription factor required for mammalian B-cell development. IKZF1 deficiency also reduces plasmacytoid dendritic cell (pDC) numbers in mice, but its effects on human DC development are unknown. Here we show that heterozygous mutation of IKZF1 in human decreases pDC numbers and expands conventional DC1 (cDC1). Lenalidomide, a drug that induces proteosomal degradation of IKZF1, also decreases pDC numbers in vivo, and reduces the ratio of pDC/cDC1 differentiated from progenitor cells in vitro in a dose-dependent manner. In addition, non-classical monocytes are reduced by IKZF1 deficiency in vivo. DC and monocytes from patients with IKZF1 deficiency or lenalidomide-treated cultures secrete less IFN-α, TNF and IL-12. These results indicate that human DC development and function are regulated by IKZF1, providing further insights into the consequences of IKZF1 mutation on immune function and the mechanism of immunomodulation by lenalidomide.

Indexed as

Dendritic CellsHaploinsufficiencyHematopoiesisHumansIkaros Transcription FactorInterferon-alphaInterleukin-12LenalidomideIkaros Transcription FactorIKZF1 protein, humanInterferon-alphaInterleukin-12Lenalidomide

Identifiers

PMID29588478
PMCPMC5869589
OpenAlexW2794592597

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.