ArticleBMC genomics2018
Combining QTL-seq and linkage mapping to fine map a wild soybean allele characteristic of greater plant height.
Article in BMC genomics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.
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35 citing papers in PubMed.
- Advances in mutant characterization for detecting causal mutations in crop plants.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026Review
- Haplotype-based genome-wide association study uncovers QTL for fruit-related traits in the 287 tomato accessions.BMC plant biology · 2026Article
- QTL-Seq Identifies Extra QTLs and Candidate Genes Controlling High Haploid Induction Rate in Maize.Plants (Basel, Switzerland) · 2026Article
- Identification of quantitative trait loci for lodging and related agronomic traits in soybean (Glycine max [L.] Merr.).BMC genomics · 2024Article
- Deploying QTL-seq rapid identification and separation of the major QTLs of tassel branch number for fine-mapping in advanced maize populations.Molecular breeding : new strategies in plant improvement · 2023Article
- Genome-wide survey identified superior and rare haplotypes for plant height in the north-eastern soybean germplasm of China.Molecular breeding : new strategies in plant improvement · 2023Article
- Functional Bph14 from Rathu Heenati promotes resistance to BPH at the early seedling stage of rice (Oryza sativa L.) as revealed by QTL-seq.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023Article
- Article
- Identification of superior haplotypes in a diverse natural population for breeding desirable plant height in soybean.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022Article
- Fine mapping and candidate gene analysis of proportion of four-seed pods by soybean CSSLs.Frontiers in plant science · 2022Article
- Progress and prospectus in genetics and genomics ofFrontiers in genetics · 2022Review
- Harnessing the potential of bulk segregant analysis sequencing and its related approaches in crop breeding.Frontiers in genetics · 2022Review
- Construction of Chromosome Segment Substitution Lines and Inheritance of Seed-Pod Characteristics in Wild Soybean.Frontiers in plant science · 2022Article
- Protein Biofortification in Lentils (Frontiers in plant science · 2022Article
- Combining QTL-seq and linkage mapping to uncover the genetic basis of single vs. paired spikelets in the advanced populations of two-ranked maize×teosinte.BMC plant biology · 2021Article
- QTL mapping for low temperature germination in rapeseed.Scientific reports · 2021Article
- Article
- Genetic mapping high protein content QTL from soybean 'Nanxiadou 25' and candidate gene analysis.BMC plant biology · 2021Article
- Genome-wide association analysis for yield-related traits at the R6 stage in a Chinese soybean mini core collection.Genes & genomics · 2021Article
- Transgressive resistance to Heterodera glycines in chromosome segment substitution lines derived from susceptible soybean parents.The plant genome · 2021Article
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7 authors.
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Abstract
backgroundPlant height (PH) is an important agronomic trait and is closely related to yield in soybean [Glycine max (L.) Merr.]. Previous studies have identified many QTLs for PH. Due to the complex genetic background of PH in soybean, there are few reports on its fine mapping.
resultsIn this study, we used a mapping population derived from a cross between a chromosome segment substitution line CSSL3228 (donor N24852 (G. Soja), a receptor NN1138-2 (G. max)) and NN1138-2 to fine map a wild soybean allele of greater PH by QTL-seq and linkage mapping. We identified a QTL for PH in a 1.73 Mb region on soybean chromosome 13 through QTL-seq, which was confirmed by SSR marker-based classical QTL mapping in the mapping population. The linkage analysis showed that the QTLs of PH were located between the SSR markers BARCSOYSSR_13_1417 and BARCSOYSSR_13_1421 on chromosome 13, and the physical distance was 69.3 kb. RT-PCR and sequence analysis of possible candidate genes showed that Glyma.13 g249400 revealed significantly higher expression in higher PH genotypes, and the gene existed 6 differences in the amino acids encoding between the two parents.
conclusionsData presented here provide support for Glyma.13 g249400 as a possible candidate genes for higher PH in wild soybean line N24852.
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