Evidence map›Paper›PMID 29582646›Full record

ArticleAsian Pacific journal of cancer prevention : APJCP2018

A Germline Mutation in the BRCA1 3’UTR Variant Predicts Susceptibility to Breast Cancer in a Saudi Arabian Population

Rashid Mir, Jamsheed Javid, Ibrahim Abdullah Al Balawi, Khaled R. Alkharsah, Maha Abdel Hadi, Mostafa Abdel Rahman, Ebtesam Hamoud, Yousef Al Alawi, Attiya Bin Mohammad Al Zahrani, F M Abu-Duhier

Abstract read
In one paragraph

Article in Asian Pacific journal of cancer prevention : APJCP, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 11 citations in OpenAlex.

  1. Functional Analysis ofThe application of clinical genetics · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 1 country.

Rashid MirDivision of Cancer Molecular Genetics, Prince Fahd Bin Sultan Research Chair, Department of Medical Lab Technology, Faculty of Applied Medical Sciences, University of Tabuk, Tabuk, Saudi Arabia.Email: fabu-duhier@ut.edu.sa
Jamsheed Javid
Ibrahim Abdullah Al Balawi
Khaled R. Alkharsah
Maha Abdel Hadi
Mostafa Abdel Rahman
Ebtesam Hamoud
Yousef Al Alawi
Attiya Bin Mohammad Al Zahrani
F M Abu-Duhier
Armed Forces Hospital · SAFahd bin Sultan University · SAImam Abdulrahman Bin Faisal University · SARiyadh Armed Forces Hospital · SAUniversity of Tabuk · SA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Purpose: The impact of the BRCA1-3’UTR-variant on BRCA1 gene expression and altered responses to external stimuli was previously tested in vitro using a luciferase reporter assay. Its ability to predict breast cancer risk in women was also assessed but the conclusions were inconsistent. The present study concerns the relationship between the BRCA1-3’UTR germline variant rs8176318G>T and susceptibility to Breast cancer in an ethnic population of Saudi Arabia. Methodology: The study included 100 breast cancer patients and 100 sex matched healthy controls from the northwestern region (Tabuk) and Dammam of Saudi Arabia were investigated for the BRCA1-3’UTR germline variant rs8176318G>T using an allele specific PCR technique. Genotype distributions were then compared. Results: The frequencies of the three genotypes GG, TT and GT in our Saudi Arabian patients were 26%, 8% and 66% and in healthy controls were 45%, 5% and 50%, respectively (p=0.03). Risk of developing breast cancer was found to be significantly associated with the GT variant (OR 2.28, 1.24-4.191; RR 1.47, 1.11-1.93; P=0.007), GT+TT (OR, 2.32, 1.28-4.22; RR 1.48, 1.13-1.94; P=0.005) and the T allele (OR 1.62 , 1.072- 2.45; RR 1.28, 1.02-1.60: P=0.020). There were 2.76 and 2.28 fold increase risks of developing breast cancer associated with the TT and GT genotypes in our cases. A significant correlation was also found between the BRCA1 3’UTR variants with the stage of the disease and distant metastasis but not with age, grade, and ER, PR and her2/neu status. Conclusion : The rs8176318G/T in the 3’untranslated region (UTR) of the BRCA1 gene was found to be associatedwith increased susceptibility to breast cancer in our study population, increased risk being noted with the GT and TT genotypes. Further association studies are needed to confirm this finding in other regions of Saudi Arabia.

Indexed as

3' Untranslated RegionsGenetic Predisposition to DiseaseGerm-Line MutationPolymorphism, Single NucleotideAdultAgedBiomarkers, TumorBRCA1 ProteinBreast NeoplasmsCase-Control StudiesFemaleFollow-Up StudiesGenotypeHumansMiddle AgedNeoplasm Invasiveness3' Untranslated RegionsBiomarkers, TumorBRCA1 ProteinBRCA1 protein, humanBRCA1 3’UTR variantsBRCA1 geneER-estrogen receptorPR-progesterone receptorrs8176318G/T

Identifiers

PMID29582646
PMCPMC5980867
OpenAlexW2788461876

What OpenQuestion holds

Textmetadata
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.