Evidence map›Paper›PMID 29581263›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2018

Binding site for coenzyme A revealed in the structure of pyruvate:ferredoxin oxidoreductase from

Percival Yang-Ting Chen, Heather Aman, Mehmet Can, Stephen W Ragsdale, Catherine L Drennan

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.6field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Enzymatic Conversion of COChemical reviews · 2023
    Review
  8. Article
  9. EstablishingApplied and environmental microbiology · 2022
    Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Percival Yang-Ting ChenDepartment of Chemistry, Massachusetts Institute of Technology, Cambridge, MA 02139.
Heather AmanDepartment of Biological Chemistry, University of Michigan, Ann Arbor, MI 48109.
Mehmet CanDepartment of Biological Chemistry, University of Michigan, Ann Arbor, MI 48109.
Stephen W RagsdaleDepartment of Biological Chemistry, University of Michigan, Ann Arbor, MI 48109.ORCID 0000-0003-3938-8906
Catherine L DrennanDepartment of Chemistry, Massachusetts Institute of Technology, Cambridge, MA 02139; cdrennan@mit.edu.
University of Michigan · USHoward Hughes Medical Institute · USMassachusetts Institute of Technology · US

Funding

Overall EvaluationP41GM103403 · NIGMS · CORNELL UNIVERSITY · PI EALICK, STEVEN E · 2012 to 2017
$14.3M
Enzymology of the Reductive Acetyl-CoA PathwayR37GM039451 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI RAGSDALE, STEPHEN WILEY · 2012 to 2021
$4.0M
MECHANISMS OF METHYL TRANSFERS IN ACETYL-COA SYNTHESISR01GM039451 · NIGMS · UNIVERSITY OF WISCONSIN MILWAUKEE · PI RAGSDALE, STEPHEN WILEY · 1991 to 2011
$3.6M
Complex Metallocluster Structure and AssemblyR01GM069857 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI DRENNAN, CATHERINE L · 2004 to 2017
$3.1M
Pixel Array Detector for X-ray CrystallographyS10RR029205 · NCRR · CORNELL UNIVERSITY · PI EALICK, STEVEN E · 2010 to 2010
$1.8M
Howard Hughes Medical InstituteNCRR NIH HHS S10 RR029205NIGMS NIH HHS P41 GM103403NIGMS NIH HHS R01 GM039451NIGMS NIH HHS R01 GM069857NIGMS NIH HHS R37 GM039451
6 · The paper itself

Abstract

Pyruvate:ferredoxin oxidoreductase (PFOR) is a microbial enzyme that uses thiamine pyrophosphate (TPP), three [4Fe-4S] clusters, and coenzyme A (CoA) in the reversible oxidation of pyruvate to generate acetyl-CoA and carbon dioxide. The two electrons that are generated as a result of pyruvate decarboxylation are used in the reduction of low potential ferredoxins, which provide reducing equivalents for central metabolism, including the Wood-Ljungdahl pathway. PFOR is a member of the 2-oxoacid:ferredoxin oxidoreductase (OFOR) superfamily, which plays major roles in both microbial redox reactions and carbon dioxide fixation. Here, we present a set of crystallographic snapshots of the best-studied member of this superfamily, the PFOR from

Indexed as

Bacterial ProteinsBinding SitesCarbon DioxideCoenzyme ACrystallography, X-RayFerredoxinsKineticsMoorellaPyruvate SynthasePyruvic AcidBacterial ProteinsCarbon DioxideCoenzyme AFerredoxinsPyruvate SynthasePyruvic Acidcarbon dioxide fixationcoenzyme Agated electron transferpyruvate:ferredoxin oxidoreductasethiamine pyrophosphate

Identifiers

PMID29581263
PMCPMC5899475
OpenAlexW2793758811

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.