Evidence map›Paper›PMID 29581247›Full record

ArticleBioscience reports2018

Association of single nucleotide polymorphisms in

Lin Sun, Jun Ma, Qian Mao, Yun-Long Yang, Lin-Lin Ma, Ling Niu, Li-Feng Liu

Open access · goldAbstract read
In one paragraph

Article in Bioscience reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed, 1 pooled it
0.3field-weighted citation impact, top 44% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 1 synthesis or guideline pooled it, 7 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Lin SunDepartment of Endocrinology, The Affiliated Hospital of Beihua University, Jilin 132011, P.R. China.
Jun MaDepartment of Radiology, The Affiliated Hospital of Beihua University, Jilin 132011, P.R. China.
Qian MaoDepartment of Endocrinology, The Affiliated Hospital of Beihua University, Jilin 132011, P.R. China.
Yun-Long YangDepartment of Thoracic Surgery, The Affiliated Hospital of Beihua University, Jilin 132011, P.R. China.
Lin-Lin MaDepartment of Clinical Laboratory, The Affiliated Hospital of Beihua University, Jilin 132011, P.R. China.
Ling NiuDepartment of Stomatology, The Affiliated Hospital of Beihua University, Jilin 132011, P.R. China.
Li-Feng LiuDepartment of Graduate, Beihua University, Jilin 132013, P.R. China LiFengLiu17@163.com.
Beihua University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The present study was conducted to explore the correlations between single nucleotide polymorphisms (SNPs) in the calcium channel CACNA 1A, CACNA 1C, and CACNA 1H genes and diabetic peripheral neuropathy (DPN) amongst the Chinese population. In total, 281 patients diagnosed with type 2 diabetes participated in the present study. These patients were divided into the case group, which was subdivided into the DPN (143 cases) and the non-DPN groups (138 cases). Subsequently, 180 healthy individuals that had undergone routine health examinations were also recruited and assigned to the control group. PCR-restriction fragment length polymorphism (PCR-RFLP) was used to detect the genotype and allele frequencies of CACNA 1A, CACNA 1C, and CACNA 1H genes; logistic regression analysis to investigate the association of gene polymorphisms with DNP. Gene-gene interactions were then detected by generalized multifactor dimensionality reduction (GMDR). The results revealed that CACNA 1A rs2248069 and rsl6030, CACNA 1C rs216008 and rs2239050, and CACNA 1H rs3794619, and rs7191246 SNPs were all associated with DPN, while rs2248069, rsl6030, rs2239050, and rs7191246 polymorphisms were attributed to the susceptibility to DPN. It was also observed that the optimal models were three-, four- and five-dimensional models with a prediction accuracy of 61.05% and the greatest consistency of cross-validation was 10/10. In summary, these findings demonstrated that the SNPs in the CACNA 1A, CACNA 1C, and CACNA 1H genes were involved in the pathophysiology of DPN. In addition, polymorphisms in the CACNA 1A, CACNA 1C, and CACNA 1H genes and their interactions also had effects on DPN.

Indexed as

AgedCalcium ChannelsCalcium Channels, L-TypeCalcium Channels, N-TypeCalcium Channels, T-TypeDiabetes Mellitus, Type 2Diabetic NeuropathiesFemaleGene FrequencyGenetic Association StudiesGenetic Predisposition to DiseaseGenotypeHumansMaleMiddle AgedPeripheral Nervous System DiseasesCACNA1A protein, humanCACNA1C protein, humanCACNA1H protein, humanCalcium ChannelsCalcium Channels, L-TypeCalcium Channels, N-TypeCalcium Channels, T-TypeCACNA 1ACACNA 1CCACNA 1HCorrelationDiabetic peripheral neuropathySingle nucleotide polymorphism

Identifiers

PMID29581247
PMCPMC6435562
OpenAlexW2791787872

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.