Evidence map›Paper›PMID 29581097›Full record

ArticleThe EMBO journal2018

Spatial separation between replisome- and template-induced replication stress signaling.

Néstor García-Rodríguez, Magdalena Morawska, Ronald P Wong, Yasukazu Daigaku, Helle D Ulrich

Open access · hybridAbstract read
In one paragraph

Article in The EMBO journal, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
3.5field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 55 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Néstor García-RodríguezInstitute of Molecular Biology (IMB), Mainz, Germany.ORCID 0000-0002-4049-1604
Magdalena MorawskaInstitute of Molecular Biology (IMB), Mainz, Germany.
Ronald P WongInstitute of Molecular Biology (IMB), Mainz, Germany.ORCID 0000-0002-4652-514X
Yasukazu DaigakuCancer Research UK London Research Institute, Clare Hall Laboratories, Blanche Lane South Mimms, UK.
Helle D UlrichInstitute of Molecular Biology (IMB), Mainz, Germany h.ulrich@imb-mainz.de.ORCID 0000-0003-0431-2223
Institute of Molecular Biology · DECancer Research UK · GB

Funding

Cancer Research UK
6 · The paper itself

Abstract

Polymerase-blocking DNA lesions are thought to elicit a checkpoint response via accumulation of single-stranded DNA at stalled replication forks. However, as an alternative to persistent fork stalling, re-priming downstream of lesions can give rise to daughter-strand gaps behind replication forks. We show here that the processing of such structures by an exonuclease, Exo1, is required for timely checkpoint activation, which in turn prevents further gap erosion in S phase. This Rad9-dependent mechanism of damage signaling is distinct from the Mrc1-dependent, fork-associated response to replication stress induced by conditions such as nucleotide depletion or replisome-inherent problems, but reminiscent of replication-independent checkpoint activation by single-stranded DNA Our results indicate that while replisome stalling triggers a checkpoint response directly at the stalled replication fork, the response to replication stress elicited by polymerase-blocking lesions mainly emanates from Exo1-processed, postreplicative daughter-strand gaps, thus offering a mechanistic explanation for the dichotomy between replisome- versus template-induced checkpoint signaling.

Indexed as

Cell Cycle CheckpointsCell Cycle ProteinsDNA, FungalDNA ReplicationExodeoxyribonucleasesSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsS PhaseCell Cycle ProteinsDNA, Fungalexodeoxyribonuclease IExodeoxyribonucleasesMRC1 protein, S cerevisiaerad9 proteinSaccharomyces cerevisiae ProteinsDNA damage bypassDNA damage checkpointExo1postreplication repairreplication stress

Identifiers

PMID29581097
PMCPMC5920239
OpenAlexW2791448060

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.