Evidence map›Paper›PMID 29578038›Full record

ArticleJournal of neuroscience methods2018

An ensemble learning system for a 4-way classification of Alzheimer's disease and mild cognitive impairment.

Dongren Yao, Vince D Calhoun, Zening Fu, Yuhui Du, Jing Sui

Abstract read
In one paragraph

Article in Journal of neuroscience methods, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Dongren YaoBrainnetome Center and NLPR, Institute of Automation, CAS, Beijing, China; University of Chinese Academy of Sciences, Beijing, China.
Vince D CalhounThe Mind Research Network, NM, USA; Dept. of Psychiatry and Neuroscience, University of New Mexico, NM, USA; Department of Electrical and Computer Engineering, University of New Mexico, NM, USA.
Zening FuThe Mind Research Network, NM, USA.
Yuhui DuThe Mind Research Network, NM, USA; Shanxi University, School of Computer & Information Technology, Taiyuan, China.
Jing SuiBrainnetome Center and NLPR, Institute of Automation, CAS, Beijing, China; University of Chinese Academy of Sciences, Beijing, China; CAS Center for Excellence in Brain Science, Institute of Automation, Beijing, China. Electronic address: kittysj@gmail.com.

Funding

Transcranial Direct Current Stimulation for Treatment of Auditory Verbal HalluciP20GM103472 · NIGMS · THE MIND RESEARCH NETWORK · PI CALHOUN, VINCE D · 2012 to 2017
$14.3M
Mining the Genomewide Scan: Genetic Profiles of Structural Loss in Schizophrenia: AD/ADRD supplementR01MH094524 · NIMH · THE MIND RESEARCH NETWORK · PI CALHOUN, VINCE D, TURNER, JESS · 2012 to 2021
$6.3M
Informed Data-Driven Fusion of Behavior, Brain Function, and GenesR01EB005846 · NIBIB · THE MIND RESEARCH NETWORK · PI CALHOUN, VINCE D · 2005 to 2016
$5.5M
Data-driven approaches to identify biomarkers from multimodal imaging big dataR56MH117107 · NIMH · THE MIND RESEARCH NETWORK · PI SUI, JING · 2018 to 2018
$453k
NIBIB NIH HHS R01 EB005846NIGMS NIH HHS P20 GM103472NIMH NIH HHS R01 MH094524NIMH NIH HHS R56 MH117107
6 · The paper itself

Abstract

Discriminating Alzheimer's disease (AD) from its prodromal form, mild cognitive impairment (MCI), is a significant clinical problem that may facilitate early diagnosis and intervention, in which a more challenging issue is to classify MCI subtypes, i.e., those who eventually convert to AD (cMCI) versus those who do not (MCI). To solve this difficult 4-way classification problem (AD, MCI, cMCI and healthy controls), a competition was hosted by Kaggle to invite the scientific community to apply their machine learning approaches on pre-processed sets of T1-weighted magnetic resonance images (MRI) data and the demographic information from the international Alzheimer's disease neuroimaging initiative (ADNI) database. This paper summarizes our competition results. We first proposed a hierarchical process by turning the 4-way classification into five binary classification problems. A new feature selection technology based on relative importance was also proposed, aiming to identify a more informative and concise subset from 426 sMRI morphometric and 3 demographic features, to ensure each binary classifier to achieve its highest accuracy. As a result, about 2% of the original features were selected to build a new feature space, which can achieve the final four-way classification with a 54.38% accuracy on testing data through hierarchical grouping, higher than several alternative methods in comparison. More importantly, the selected discriminative features such as hippocampal volume, parahippocampal surface area, and medial orbitofrontal thickness, etc. as well as the MMSE score, are reasonable and consistent with those reported in AD/MCI deficits. In summary, the proposed method provides a new framework for multi-way classification using hierarchical grouping and precise feature selection.

Indexed as

Machine LearningAgedAlzheimer DiseaseBrainCognitive DysfunctionDatabases, FactualFemaleHumansImage Interpretation, Computer-AssistedMagnetic Resonance ImagingMalePattern Recognition, AutomatedAlzheimer’s disease(AD)Feature selectionHierarchical classificationMild cognitive impairment (MCI)Multi-class classificationRelative importanceStructural MRI

Identifiers

PMID29578038
PMCPMC7368970

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.