Evidence map›Paper›PMID 29577594›Full record

ArticleMolecular nutrition & food research2018

Butyrate Inhibits Indices of Colorectal Carcinogenesis via Enhancing α-Ketoglutarate-Dependent DNA Demethylation of Mismatch Repair Genes.

Xiaofei Sun, Mei-Jun Zhu

Open access · greenAbstract read
In one paragraph

Article in Molecular nutrition & food research, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 42 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Xiaofei SunSchool of Food Science, Washington State University, Pullman, WA, 99164, USA.ORCID 0000-0002-4835-9309
Mei-Jun ZhuSchool of Food Science, Washington State University, Pullman, WA, 99164, USA.
Washington State University · US

Funding

Maternal Obesity, AMPK and Development of Fetal and Neonatal GutR15HD073864 · NICHD · UNIVERSITY OF WYOMING · PI ZHU, MEIJUN · 2012 to 2012
$412k
NICHD NIH HHS R15 HD073864
6 · The paper itself

Abstract

scopeButyrate, the fermentation end product of gut microbiota in the colon, is known for its antitumor effects, but the mechanisms remained to be defined. α-ketoglutarate (α-KG) mediates DNA demethylation and aberrant epigenetic modifications are associated with carcinogenesis. The objectives of this study are to evaluate the effects of butyrate on α-KG mediated epigenetic modification in colorectal adenocarcinoma HT-29 and Caco-2 cells. METHODS AND

resultsButyrate suppressed proliferation, potentiated differentiation, and induced apoptosis in both HT-29 and Caco-2 cells, associated with enhanced expression of isocitrate dehydrogenase 1 (IDH1) and pyruvate dehydrogenase. Furthermore, butyrate upregulated acetyl-CoA and α-KG, concomitant with enhanced histone acetylation and DNA demethylation in the promoter of DNA mismatch repair (MMR) gene. Knocking down IDH1 abolished the positive effects of butyrate on CRC apoptosis and MMR protein expression, in conjunction with reduced α-KG content. Importantly, α-KG supplementation recovered the beneficial effects of butyrate in IDH1-deficient cells.

conclusionIn summary, butyrate inhibits indices of colorectal carcinogenesis in an α-KG-dependent manner.

Indexed as

AcetylationAntineoplastic AgentsApoptosisButyratesCaco-2 CellsCell DifferentiationCell ProliferationColorectal NeoplasmsDNA DemethylationDNA Mismatch RepairHistonesHumansIsocitrate DehydrogenaseKetoglutaric AcidsAntineoplastic AgentsButyratesHistonesIDH1 protein, humanIsocitrate DehydrogenaseKetoglutaric Acidsbutyratecolorectal cancerdifferentiationDNA mismatch repair proteinIDH1α-ketoglutarate

Identifiers

PMID29577594
PMCPMC6467497
OpenAlexW2794155473

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.