Evidence map›Paper›PMID 29576390›Full record

ArticleNeuron2018

Role for Wnt Signaling in Retinal Neuropil Development: Analysis via RNA-Seq and In Vivo Somatic CRISPR Mutagenesis.

Sumeet Sarin, Elizabeth Zuniga-Sanchez, Yerbol Z Kurmangaliyev, Henry Cousins, Mili Patel, Jeanette Hernandez, Kelvin X Zhang, Melanie A Samuel, Marta Morey, Joshua R Sanes and 1 more

Open access · greenAbstract read
In one paragraph

Article in Neuron, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 59 papers.

0numbers the graph read from it
0cells of the map it votes in
59citing papers in PubMed
4.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

59 citing papers in PubMed, 93 citations in OpenAlex.

  1. Protocadherin 9 Promotes Cell Survival of Different Bipolar Cell Types in the Developing Mouse Retina.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2026
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  10. Enhanced Transcriptional Activation in Developing Mouse Photoreceptors.Investigative ophthalmology & visual science · 2025
    Article
  11. Cardiac Applications of CRISPR/AAV-Mediated Precise Genome Editing.bioRxiv : the preprint server for biology · 2024
    Article
  12. Article
  13. Article
  14. Synaptotagmin-9 in mouse retina.Visual neuroscience · 2024
    Article
  15. Article
  16. Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Sumeet SarinCenter for Brain Science and Department of Molecular and Cellular Biology, Harvard University, Cambridge, MA 02130, USA.
Elizabeth Zuniga-SanchezDepartment of Biological Chemistry, HHMI, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA 90095, USA.
Yerbol Z KurmangaliyevDepartment of Biological Chemistry, HHMI, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA 90095, USA.
Henry CousinsCenter for Brain Science and Department of Molecular and Cellular Biology, Harvard University, Cambridge, MA 02130, USA.
Mili PatelCenter for Brain Science and Department of Molecular and Cellular Biology, Harvard University, Cambridge, MA 02130, USA.
Jeanette HernandezDepartment of Biological Chemistry, HHMI, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA 90095, USA.
Kelvin X ZhangDepartment of Biological Chemistry, HHMI, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA 90095, USA.
Melanie A SamuelCenter for Brain Science and Department of Molecular and Cellular Biology, Harvard University, Cambridge, MA 02130, USA.
Marta MoreyDepartment of Biological Chemistry, HHMI, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA 90095, USA.
Joshua R SanesCenter for Brain Science and Department of Molecular and Cellular Biology, Harvard University, Cambridge, MA 02130, USA. Electronic address: sanesj@mcb.harvard.edu.
S Lawrence ZipurskyDepartment of Biological Chemistry, HHMI, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA 90095, USA. Electronic address: lzipursky@mednet.ucla.edu.
University of California, Los Angeles · USHarvard University · US

Funding

Neuroengineering Core Core Facilities for Analysis of Neural Circuit Structure aP30NS062685 · NINDS · HARVARD UNIVERSITY · PI SANES, JOSHUA R · 2008 to 2017
$6.8M
Training Grant in Neurobehavioral GeneticsT32NS048004 · NINDS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI BEARDEN, CARRIE E, OPHOFF, ROEL A · 2004 to 2025
$5.8M
Synaptic Choices in the Retinotectal SystemR37NS029169 · NINDS · HARVARD UNIVERSITY · PI SANES, JOSHUA R · 2013 to 2019
$4.0M
The regulation of synaptic specificity in the mammalian retinaR00EY028200 · NEI · BAYLOR COLLEGE OF MEDICINE · PI ZUNIGA-SANCHEZ, ELIZABETH · 2020 to 2022
$723k
Screen for determinants of synaptic specificity in outer retina.R21EY025421 · NEI · HARVARD UNIVERSITY · PI SANES, JOSHUA R · 2015 to 2016
$465k
The regulation of synaptic specificity in the mammalian retinaK99EY028200 · NEI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI ZUNIGA-SANCHEZ, ELIZABETH · 2017 to 2018
$215k
Howard Hughes Medical InstituteNEI NIH HHS K99 EY028200NEI NIH HHS R00 EY028200NEI NIH HHS R21 EY025421NINDS NIH HHS P30 NS062685NINDS NIH HHS R37 NS029169NINDS NIH HHS T32 NS048004
6 · The paper itself

Abstract

Screens for genes that orchestrate neural circuit formation in mammals have been hindered by practical constraints of germline mutagenesis. To overcome these limitations, we combined RNA-seq with somatic CRISPR mutagenesis to study synapse development in the mouse retina. Here synapses occur between cellular layers, forming two multilayered neuropils. The outer neuropil, the outer plexiform layer (OPL), contains synapses made by rod and cone photoreceptor axons on rod and cone bipolar dendrites, respectively. We used RNA-seq to identify selectively expressed genes encoding cell surface and secreted proteins and CRISPR-Cas9 electroporation with cell-specific promoters to assess their roles in OPL development. Among the genes identified in this way are Wnt5a and Wnt5b. They are produced by rod bipolars and activate a non-canonical signaling pathway in rods to regulate early OPL patterning. The approach we use here can be applied to other parts of the brain.

Indexed as

AnimalsAnimals, NewbornClustered Regularly Interspaced Short Palindromic RepeatsFemaleMaleMiceMice, TransgenicMutagenesisNeuropilRabbitsRetinaSequence Analysis, RNAWnt Signaling PathwaybipolarsFzd4Fzd5neuronOPLphotoreceptorsretinaRyksynapseWnt5

Identifiers

PMID29576390
PMCPMC5930001
OpenAlexW2790581709

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.