Evidence map›Paper›PMID 29572474›Full record

ArticleNature communications2018

Ecological control of nitrite in the upper ocean.

Emily J Zakem, Alia Al-Haj, Matthew J Church, Gert L van Dijken, Stephanie Dutkiewicz, Sarah Q Foster, Robinson W Fulweiler, Matthew M Mills, Michael J Follows

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Nature communications, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
13.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 184 citations in OpenAlex.

  1. Microbial niche partitioning explains NProceedings of the National Academy of Sciences of the United States of America · 2026
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  5. Resource diversity disturbs marineEcology and evolution · 2024
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  13. Direct Air Capture of COInternational journal of environmental research and public health · 2022
    Article
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  16. Review
  17. Phytoplankton Communities and Their Relationship with Environmental Factors in the Waters around Macau.International journal of environmental research and public health · 2022
    Article
  18. Article
  19. Article
  20. Trophic interactions with heterotrophic bacteria limit the range ofProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 1 country.

Emily J ZakemDepartment of Earth, Atmospheric and Planetary Sciences, Massachusetts Institute of Technology, Cambridge, MA, 02139, USA. ezakem@mit.edu.ORCID http://orcid.org/0000-0001-6799-5063
Alia Al-HajDepartment of Earth and Environment, Boston University, Boston, MA, 02215, USA.ORCID http://orcid.org/0000-0003-1899-5117
Matthew J ChurchFlathead Lake Biological Station, University of Montana, Polson, MT, 59860, USA.
Gert L van DijkenDepartment of Earth System Science, Stanford University, Stanford, CA, 94305, USA.ORCID http://orcid.org/0000-0002-9587-6317
Stephanie DutkiewiczDepartment of Earth, Atmospheric and Planetary Sciences, Massachusetts Institute of Technology, Cambridge, MA, 02139, USA.
Sarah Q FosterDepartment of Earth and Environment, Boston University, Boston, MA, 02215, USA.ORCID http://orcid.org/0000-0003-1325-8708
Robinson W FulweilerDepartment of Earth and Environment, Boston University, Boston, MA, 02215, USA.ORCID http://orcid.org/0000-0003-0871-4246
Matthew M MillsDepartment of Earth System Science, Stanford University, Stanford, CA, 94305, USA.ORCID http://orcid.org/0000-0002-9738-5589
Michael J FollowsDepartment of Earth, Atmospheric and Planetary Sciences, Massachusetts Institute of Technology, Cambridge, MA, 02139, USA.
Boston University · USMassachusetts Institute of Technology · USStanford University · USUniversity of Montana · USUniversity of Southern California · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Microorganisms oxidize organic nitrogen to nitrate in a series of steps. Nitrite, an intermediate product, accumulates at the base of the sunlit layer in the subtropical ocean, forming a primary nitrite maximum, but can accumulate throughout the sunlit layer at higher latitudes. We model nitrifying chemoautotrophs in a marine ecosystem and demonstrate that microbial community interactions can explain the nitrite distributions. Our theoretical framework proposes that nitrite can accumulate to a higher concentration than ammonium because of differences in underlying redox chemistry and cell size between ammonia- and nitrite-oxidizing chemoautotrophs. Using ocean circulation models, we demonstrate that nitrifying microorganisms are excluded in the sunlit layer when phytoplankton are nitrogen-limited, but thrive at depth when phytoplankton become light-limited, resulting in nitrite accumulation there. However, nitrifying microorganisms may coexist in the sunlit layer when phytoplankton are iron- or light-limited (often in higher latitudes). These results improve understanding of the controls on nitrification, and provide a framework for representing chemoautotrophs and their biogeochemical effects in ocean models.

Identifiers

PMID29572474
PMCPMC5865239
OpenAlexW2791263319

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.