Evidence map›Paper›PMID 29572253›Full record

ArticleJournal of medical genetics2018

Inframe deletion of human

Zubair M Ahmed, Thomas J Jaworek, Gowri N Sarangdhar, Lili Zheng, Khitab Gul, Shaheen N Khan, Thomas B Friedman, Robert A Sisk, James R Bartles, Sheikh Riazuddin and 1 more

Abstract read
In one paragraph

Article in Journal of medical genetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.7field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 25 citations in OpenAlex.

  1. FAM92A Underlies Nonsyndromic Postaxial Polydactyly in Humans and an Abnormal Limb and Digit Skeletal Phenotype in Mice.Journal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research · 2019
    Trial
  2. Article
  3. Review
  4. Review
  5. Article
  6. Review
  7. Review
  8. Article
  9. Usher Syndrome.Audiology research · 2022
    Review
  10. Usher Syndrome: Genetics of a Human Ciliopathy.International journal of molecular sciences · 2021
    Review
  11. USH2A-retinopathy: From genetics to therapeutics.Experimental eye research · 2020
    Review
  12. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 7 institutions in 2 countries.

Zubair M AhmedDepartment of Otorhinolaryngology Head and Neck Surgery, School of Medicine, University of Maryland, Baltimore, Maryland, USA.
Thomas J Jaworek *Department of Otorhinolaryngology Head and Neck Surgery, School of Medicine, University of Maryland, Baltimore, Maryland, USA.
Gowri N Sarangdhar *Abrahamson Pediatric Eye Institute, Cincinnati Children's Hospital, Cincinnati, Ohio, USA.
Lili ZhengDepartment of Cell and Molecular Biology, School of Medicine, Northwestern University Feinberg, Chicago, Illinois, USA.
Khitab GulAbrahamson Pediatric Eye Institute, Cincinnati Children's Hospital, Cincinnati, Ohio, USA.
Shaheen N KhanCenter for Excellence in Molecular Biology, University of the Punjab, Lahore, Pakistan.
Thomas B FriedmanLaboratory of Molecular Genetics, National Institute on Deafness and Other Communication Disorder, National Institutes of Health, Bethesda, Maryland, USA.
Robert A SiskAbrahamson Pediatric Eye Institute, Cincinnati Children's Hospital, Cincinnati, Ohio, USA.
James R BartlesDepartment of Cell and Molecular Biology, School of Medicine, Northwestern University Feinberg, Chicago, Illinois, USA.
Sheikh RiazuddinShaheed Zulfiqar Ali Bhutto Medical University, Islamabad, Pakistan.
Saima RiazuddinDepartment of Otorhinolaryngology Head and Neck Surgery, School of Medicine, University of Maryland, Baltimore, Maryland, USA.
University of Maryland, Baltimore · USCincinnati Eye Institute · USNorthwestern University · USAllama Iqbal Medical College · PKCincinnati Children's Hospital Medical Center · USNational Institute on Deafness and Other Communication Disorders · USUniversity of the Punjab · PK

Funding

Identification of Genes Causing Syndromic And Nonsyndromic Hearing ImpairmentZIADC000039 · NIDCD · NATIONAL INSTITUTE ON DEAFNESS AND OTHER COMMUNICATION DISORDERS · PI FRIEDMAN, THOMAS · 2009 to 2025
$48.7M
THE ROLES OF ESPINS IN HAIR CELL STEREOCILIAR01DC004314 · NIDCD · NORTHWESTERN UNIVERSITY AT CHICAGO · PI BARTLES, JAMES R · 2000 to 2019
$8.0M
Identification of Genes Causing Syndromic And Nonsyndromic Hearing ImpairmentZ01DC000039 · NIDCD · NATIONAL INSTITUTE ON DEAFNESS AND OTHER COMMUNICATION DISORDERS · PI FRIEDMAN, THOMAS BAER · 1997 to 2008
$7.2M
Usher Proteins in the Inner Ear Structure and FunctionR01DC012564 · NIDCD · UNIVERSITY OF MARYLAND BALTIMORE · PI Zubair M. Ahmed, Gregory I Frolenkov · 2013 to 2026
$7.0M
Molecular Determinants of Usher Syndrome Disorder in HumansR01DC016295 · NIDCD · UNIVERSITY OF MARYLAND BALTIMORE · PI AHMED, ZUBAIR M. · 2018 to 2022
$2.7M
Identifying Genes for Non-Syndromic Recessive Deafness-A Collaborative StudyR56DC011803 · NIDCD · UNIVERSITY OF MARYLAND BALTIMORE · PI RIAZUDDIN, SAIMA · 2017 to 2017
$638k
SPEECH AND HEARING SCIENCEST32DC000039 · NIDCD · CUNY GRADUATE SCH AND UNIV CTR · PI SCHWARTZ, RICHARD G · 1992 to 2002
$429k
Intramural NIH HHS Z01 DC000039NIDCD NIH HHS R01 DC004314NIDCD NIH HHS R01 DC012564NIDCD NIH HHS R01 DC016295NIDCD NIH HHS R56 DC011803NIDCD NIH HHS T32 DC000039
6 · The paper itself

Abstract

backgroundUsher syndrome (USH) is a neurosensory disorder characterised by deafness, variable vestibular areflexia and vision loss. The aim of the study was to identify the genetic defect in a Pakistani family (PKDF1051) segregating USH.

methodsGenome-wide linkage analysis was performed by using an Illumina linkage array followed by Sanger and exome sequencing. Heterologous cells and mouse organ of Corti explant-based transfection assays were used for functional evaluations. Detailed clinical evaluations were performed to characterise the USH phenotype.

resultsThrough homozygosity mapping, we genetically linked the USH phenotype segregating in family PKDF1051 to markers on chromosome 1p36.32-p36.22. The locus was designated

conclusionOur study uncovers an additional USH gene, assigns the USH1 phenotype to a variant of

Indexed as

AdultAnimalsBenign Paroxysmal Positional VertigoDeafnessExome SequencingGenetic LinkageGenetic Predisposition to DiseaseGenotypeHomozygoteHumansMiceMicrofilament ProteinsMutationPedigreePhenotypeRetinaESPN protein, humanMicrofilament Proteinsdeafnessusher syndromevision impairment

Identifiers

PMID29572253
PMCPMC6232856
OpenAlexW2790305006

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.