Evidence map›Paper›PMID 29570925›Full record

ArticlePlant biotechnology journal2018

An epigenetic breeding system in soybean for increased yield and stability.

Sunil K Kenchanmane Raju, Mon-Ray Shao, Robersy Sanchez, Ying-Zhi Xu, Ajay Sandhu, George Graef, Sally Mackenzie

Open access · goldAbstract read
In one paragraph

Article in Plant biotechnology journal, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed, 1 pooled it
17.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 1 synthesis or guideline pooled it, 109 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Epigenomics and Non-Coding RNAs in Soybean Adaptation to Abiotic Stresses.International journal of molecular sciences · 2025
    Review
  9. Article
  10. Article
  11. Article
  12. Epigenetic responses of trees to environmental stress in the context of climate change.Biological reviews of the Cambridge Philosophical Society · 2025
    Review
  13. Review
  14. Review
  15. Review
  16. Non-CG DNA hypomethylation promotes photosynthesis and nitrogen fixation in soybean.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  17. Expansion of the MutS Gene Family in Plants.bioRxiv : the preprint server for biology · 2024
    Article
  18. Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Sunil K Kenchanmane RajuDepartment of Agronomy and Horticulture, University of Nebraska-Lincoln, Lincoln, NE, USA.
Mon-Ray ShaoDepartment of Agronomy and Horticulture, University of Nebraska-Lincoln, Lincoln, NE, USA.
Robersy SanchezDepartment of Agronomy and Horticulture, University of Nebraska-Lincoln, Lincoln, NE, USA.
Ying-Zhi XuDepartment of Agronomy and Horticulture, University of Nebraska-Lincoln, Lincoln, NE, USA.
Ajay SandhuDepartment of Agronomy and Horticulture, University of Nebraska-Lincoln, Lincoln, NE, USA.
George GraefDepartment of Agronomy and Horticulture, University of Nebraska-Lincoln, Lincoln, NE, USA.
Sally MackenzieDepartment of Agronomy and Horticulture, University of Nebraska-Lincoln, Lincoln, NE, USA.ORCID 0000-0003-2077-5607
University of Nebraska–Lincoln · US

Funding

Bill and Melinda Gates Foundation OPP1088661National Science Foundation IOS1126935
6 · The paper itself

Abstract

Epigenetic variation has been associated with a wide range of adaptive phenotypes in plants, but there exist few direct means for exploiting this variation. RNAi suppression of the plant-specific gene, MutS HOMOLOG1 (MSH1), in multiple plant species produces a range of developmental changes accompanied by modulation of defence, phytohormone and abiotic stress response pathways along with methylome repatterning. This msh1-conditioned developmental reprogramming is retained independent of transgene segregation, giving rise to transgene-null 'memory' effects. An isogenic memory line crossed to wild type produces progeny families displaying increased variation in adaptive traits that respond to selection. This study investigates amenability of the MSH1 system for inducing agronomically valuable epigenetic variation in soybean. We developed MSH1 epi-populations by crossing with msh1-acquired soybean memory lines. Derived soybean epi-lines showed increase in variance for multiple yield-related traits including pods per plant, seed weight and maturity time in both glasshouse and field trials. Selected epi-F

Indexed as

Epigenesis, GeneticCrop ProductionGene Expression ProfilingGenes, PlantGenetic Association StudiesGlycine maxPlant BreedingPlant ProteinsPlant ProteinsGxEheterosisplant memoryRNA interferencetranscriptome

Identifiers

PMID29570925
PMCPMC6181216
OpenAlexW2779138810

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.