Evidence map›Paper›PMID 29570707›Full record

ArticlePLoS genetics2018

Long-lived rodents reveal signatures of positive selection in genes associated with lifespan.

Arne Sahm, Martin Bens, Karol Szafranski, Susanne Holtze, Marco Groth, Matthias Görlach, Cornelis Calkhoven, Christine Müller, Matthias Schwab, Johann Kraus and 6 more

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
3.1field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 62 citations in OpenAlex.

  1. Evolutionary genetics of ageing.Nature reviews. Genetics · 2026
    Review
  2. Article
  3. Article
  4. Review
  5. Parallel Selection for Longevity in Mammals and Birds.bioRxiv : the preprint server for biology · 2025
    Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Review
  13. Article
  14. Unique Features of the Tissue Structure in the Naked Mole Rat (International journal of molecular sciences · 2022
    Article
  15. Article
  16. Article
  17. An Analysis of Methylome Evolution in Primates.Molecular biology and evolution · 2021
    Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 7 institutions in 3 countries.

Arne SahmLeibniz Institute on Aging-Fritz Lipmann Institute, Jena, Germany.ORCID 0000-0002-7330-1790
Martin BensLeibniz Institute on Aging-Fritz Lipmann Institute, Jena, Germany.ORCID 0000-0001-7940-6668
Karol SzafranskiLeibniz Institute on Aging-Fritz Lipmann Institute, Jena, Germany.ORCID 0000-0001-6391-1766
Susanne HoltzeDepartment of Reproduction Management, Leibniz Institute for Zoo and Wildlife Research, Berlin, Germany.ORCID 0000-0002-4654-1916
Marco GrothLeibniz Institute on Aging-Fritz Lipmann Institute, Jena, Germany.ORCID 0000-0002-9199-8990
Matthias GörlachLeibniz Institute on Aging-Fritz Lipmann Institute, Jena, Germany.
Cornelis CalkhovenEuropean Research Institute for the Biology of Ageing, University of Groningen, University Medical Centre Groningen, Groningen, The Netherlands.ORCID 0000-0001-6318-7210
Christine MüllerEuropean Research Institute for the Biology of Ageing, University of Groningen, University Medical Centre Groningen, Groningen, The Netherlands.
Matthias SchwabDepartment of Neurology; Jena University Hospital-Friedrich Schiller University, Jena, Germany.
Johann KrausInstitute of Medical Systems Biology, Ulm University, Ulm, Germany.
Hans A KestlerLeibniz Institute on Aging-Fritz Lipmann Institute, Jena, Germany.ORCID 0000-0002-4759-5254
Alessandro CellerinoLeibniz Institute on Aging-Fritz Lipmann Institute, Jena, Germany.
Hynek BurdaDepartment of General Zoology, Faculty of Biology, University of Duisburg-Essen, Essen, Germany.ORCID 0000-0003-2618-818X
Thomas HildebrandtDepartment of Reproduction Management, Leibniz Institute for Zoo and Wildlife Research, Berlin, Germany.
Philip DammannDepartment of General Zoology, Faculty of Biology, University of Duisburg-Essen, Essen, Germany.ORCID 0000-0002-0624-3965
Matthias PlatzerLeibniz Institute on Aging-Fritz Lipmann Institute, Jena, Germany.ORCID 0000-0003-0596-8582
Leibniz Institute on Aging - Fritz Lipmann Institute (FLI) · DELeibniz Institute for Zoo and Wildlife Research · DEUniversität Ulm · DEUniversity of Duisburg-Essen · DEUniversity of Groningen · NLJena University Hospital · DEScuola Normale Superiore · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The genetics of lifespan determination is poorly understood. Most research has been done on short-lived animals and it is unclear if these insights can be transferred to long-lived mammals like humans. Some African mole-rats (Bathyergidae) have life expectancies that are multiple times higher than similar sized and phylogenetically closely related rodents. To gain new insights into genetic mechanisms determining mammalian lifespans, we obtained genomic and transcriptomic data from 17 rodent species and scanned eleven evolutionary branches associated with the evolution of enhanced longevity for positively selected genes (PSGs). Indicating relevance for aging, the set of 250 identified PSGs showed in liver of long-lived naked mole-rats and short-lived rats an expression pattern that fits the antagonistic pleiotropy theory of aging. Moreover, we found the PSGs to be enriched for genes known to be related to aging. Among these enrichments were "cellular respiration" and "metal ion homeostasis", as well as functional terms associated with processes regulated by the mTOR pathway: translation, autophagy and inflammation. Remarkably, among PSGs are RHEB, a regulator of mTOR, and IGF1, both central components of aging-relevant pathways, as well as genes yet unknown to be aging-associated but representing convincing functional candidates, e.g. RHEBL1, AMHR2, PSMG1 and AGER. Exemplary protein homology modeling suggests functional consequences for amino acid changes under positive selection. Therefore, we conclude that our results provide a meaningful resource for follow-up studies to mechanistically link identified genes and amino acids under positive selection to aging and lifespan determination.

Indexed as

Selection, GeneticAnimalsGenomeHomeostasisIon TransportLongevityOxidative StressRodentiaSpecies SpecificityTranscriptome

Identifiers

PMID29570707
PMCPMC5884551
OpenAlexW2791718384

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.