Evidence map›Paper›PMID 29569182›Full record

ArticlePlanta2018

Biochemical characterization of rice xylan O-acetyltransferases.

Ruiqin Zhong, Dongtao Cui, Robert L Dasher, Zheng-Hua Ye

Abstract read
PubMed Publisher
In one paragraph

Article in Planta, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 35 citations in OpenAlex.

  1. Review
  2. Comprehensive characterization of potatoFrontiers in plant science · 2025
    Article
  3. Article
  4. Plant Cell Wall PolysaccharidePlants (Basel, Switzerland) · 2024
    Review
  5. Article
  6. Strong culm: a crucial trait for developing next-generation climate-resilient rice lines.Physiology and molecular biology of plants : an international journal of functional plant biology · 2024
    Review
  7. Article
  8. Article
  9. Review
  10. Global Investigation of TBL Gene Family in Rose (Frontiers in plant science · 2021
    Article
  11. MYC2-ActivatedPlant physiology · 2020
    Article
  12. Article
  13. New Insights Into Wall PolysaccharideFrontiers in plant science · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Ruiqin ZhongDepartment of Plant Biology, University of Georgia, Athens, GA, 30602, USA.
Dongtao CuiDepartment of Chemistry, University of Georgia, Athens, GA, 30602, USA.
Robert L DasherDepartment of Plant Biology, University of Georgia, Athens, GA, 30602, USA.
Zheng-Hua YeDepartment of Plant Biology, University of Georgia, Athens, GA, 30602, USA. yh@uga.edu.ORCID http://orcid.org/0000-0001-5714-744X
University of Georgia · US

Funding

U.S. Department of Energy DE-FG02-03ER15415
6 · The paper itself

Abstract

MAIN

conclusionRice xylan is predominantly monoacetylated at O-2 and O-3, and 14 rice DUF231 proteins were demonstrated to be xylan acetyltransferases. Acetylated xylans are the principal hemicellulose in the cell walls of grass species. Because xylan acetylation impedes the conversion of cellulosic biomass into biofuels, knowledge on acetyltransferases catalyzing xylan acetylation in grass species will be instrumental for a better utilization of grass biomass for biofuel production. Xylan in rice (Oryza sativa) is predominantly monoacetylated at O-2 and O-3 with a total degree of acetylation of 0.19. In this report, we have characterized 14 rice DUF231 proteins (OsXOAT1 to OsXOAT14) that are phylogenetically grouped together with Arabidopsis xylan acetyltransferases ESK1 and its close homologs. Complementation analysis demonstrated that the expression of OsXOAT1 to OsXOAT7 in the Arabidopsis esk1 mutant was able to rescue its defects in 2-O- and 3-O-monoacetylation and 2,3-di-O-acetylation. Activity assay of recombinant proteins revealed that all 14 OsXOATs exhibited acetyltransferase activities capable of transferring acetyl groups from acetyl-CoA to the xylohexaose acceptor with 10 of them having high activities. Structural analysis of the OsXOAT-catalyzed products showed that the acetylated structural units consisted mainly of 2-O- and 3-O-monoacetylated xylosyl residues with a minor amount of 2,3-di-O-acetylated xylosyl units, which is consistent with the acetyl substitution pattern of rice xylan. Further kinetic studies revealed that OsXOAT1, OsXOAT2, OsXOAT5, OsXOAT6 and OsXOAT7 had high affinity toward the xylohexaose acceptor. Our results provide biochemical evidence indicating that OsXOATs are acetyltransferases involved in xylan acetylation in rice.

Indexed as

AcetylationAcetyltransferasesArabidopsisCell WallKineticsMutationOryzaXylansAcetyltransferasesXylansAcetyltransferaseCell wallDUF231GrassOryza sativaXylan

Identifiers

PMID29569182
OpenAlexW2791903458

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.