Evidence map›Paper›PMID 29568477›Full record

ArticleChemical science2017

MD simulations and QM/MM calculations show that single-site mutations of cytochrome P450

Kshatresh Dutta Dubey, Binju Wang, Manu Vajpai, Sason Shaik

Open access · diamondAbstract read
In one paragraph

Article in Chemical science, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 44 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Kshatresh Dutta DubeyInstitute of Chemistry , The Lise Meitner-Minerva Center for Computational Quantum Chemistry , The Hebrew University of Jerusalem , 91904 , Jerusalem , Israel . Email: sason@yfaat.ch.huji.ac.il.ORCID 0000-0001-8865-7602
Binju WangInstitute of Chemistry , The Lise Meitner-Minerva Center for Computational Quantum Chemistry , The Hebrew University of Jerusalem , 91904 , Jerusalem , Israel . Email: sason@yfaat.ch.huji.ac.il.
Manu VajpaiDepartment of Biological Sciences and Bioengineering , Indian Institute of Technology-Kanpur , Kanpur-208016 , UP , India.
Sason ShaikInstitute of Chemistry , The Lise Meitner-Minerva Center for Computational Quantum Chemistry , The Hebrew University of Jerusalem , 91904 , Jerusalem , Israel . Email: sason@yfaat.ch.huji.ac.il.ORCID 0000-0001-7643-9421
Hebrew University of Jerusalem · ILChhatrapati Shahu Ji Maharaj University · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

It is a long-standing mechanistic consensus that the mutation of the proton-shuttle mediator Threonine (T) in Cytochrome P450 enzymes severs the water channel and thereby quenches the formation of the active species: the high-valent iron(iv)-oxo porphyrin π-cation radical species, compound I (Cpd I). Using MD simulations and hybrid QM/MM calculations of P450

Identifiers

PMID29568477
PMCPMC5851339
OpenAlexW2626873110

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.