Evidence map›Paper›PMID 29568077›Full record

ArticleScientific reports2018

Cellular response to persistent foot-and-mouth disease virus infection is linked to specific types of alterations in the host cell transcriptome.

Lingling Han, Xiu Xin, Hailong Wang, Jiadai Li, Yao Hao, Mingzhen Wang, Congyi Zheng, Chao Shen

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
5.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 31 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Lingling HanState Key Laboratory of Virology, College of Life Sciences, Wuhan University, Wuhan, China.
Xiu XinState Key Laboratory of Virology, College of Life Sciences, Wuhan University, Wuhan, China.
Hailong WangState Key Laboratory of Virology, College of Life Sciences, Wuhan University, Wuhan, China.
Jiadai LiState Key Laboratory of Virology, College of Life Sciences, Wuhan University, Wuhan, China.
Yao HaoState Key Laboratory of Virology, College of Life Sciences, Wuhan University, Wuhan, China.
Mingzhen WangState Key Laboratory of Virology, College of Life Sciences, Wuhan University, Wuhan, China.
Congyi ZhengState Key Laboratory of Virology, College of Life Sciences, Wuhan University, Wuhan, China.
Chao ShenState Key Laboratory of Virology, College of Life Sciences, Wuhan University, Wuhan, China. shenchao@whu.edu.cn.
Wuhan University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Food-and-mouth disease virus (FMDV) is a highly contagious virus that seriously threatens the development of animal husbandry. Although persistent FMDV infection can dramatically worsen the situation, the mechanisms involved in persistent FMDV infection remain unclear. In the present study, we identified the presence of evolved cells in the persistently FMDV-infected cell line. These cells exhibited resistance to the parent FMDV and re-established persistent infection when infected with FMDV-Op (virus supernatant of persistent infection cell lines), emphasizing the decisive role of evolved host cells in the establishment of persistent FMDV infection. Using RNA-seq, we identified the gene expression profiles of these evolved host cells. In total, 4,686 genes were differentially expressed in evolved cells compared with normal cells, with these genes being involved in metabolic processes, cell cycle, and cellular protein catabolic processes. In addition, 1,229 alternative splicing events, especially skipped exon events, were induced in evolved cells. Moreover, evolved cells exhibited a stronger immune defensive response and weaker MAPK signal response than normal cells. This comprehensive transcriptome analysis of evolved host cells lays the foundation for further investigations of the molecular mechanisms of persistent FMDV infection and screening for genes resistant to FMDV infection.

Indexed as

Alternative SplicingAnimalsCattleCattle DiseasesCell LineFoot-and-Mouth DiseaseFoot-and-Mouth Disease VirusGene Expression ProfilingHigh-Throughput Nucleotide SequencingHost-Pathogen InteractionsMesocricetusMiceTranscriptomeVirus Replication

Identifiers

PMID29568077
PMCPMC5864922
OpenAlexW2790128175

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.