Evidence map›Paper›PMID 29567311›Full record

ArticleMolecular therapy : the journal of the American Society of Gene Therapy2018

Conditional Regulation of Gene Expression by Ligand-Induced Occlusion of a MicroRNA Target Sequence.

Huihui Mou, Guocai Zhong, Matthew R Gardner, Haimin Wang, Yi-Wen Wang, Dechun Cheng, Michael Farzan

Open access · hybridAbstract read
In one paragraph

Article in Molecular therapy : the journal of the American Society of Gene Therapy, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 29 citations in OpenAlex.

  1. Review
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  13. Next RNA Therapeutics: The Mine of Non-Coding.International journal of molecular sciences · 2022
    Review
  14. Article
  15. Review
  16. Article
  17. AAV Vectored Immunoprophylaxis for Filovirus Infections.Tropical medicine and infectious disease · 2020
    Review
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 1 institution in 2 countries.

Huihui MouDepartment of Immunology and Microbiology, The Scripps Research Institute, Jupiter, FL 33458, USA.
Guocai ZhongDepartment of Immunology and Microbiology, The Scripps Research Institute, Jupiter, FL 33458, USA. Electronic address: gzhong@scripps.edu.
Matthew R GardnerDepartment of Immunology and Microbiology, The Scripps Research Institute, Jupiter, FL 33458, USA.
Haimin WangDepartment of Immunology and Microbiology, The Scripps Research Institute, Jupiter, FL 33458, USA.
Yi-Wen WangDepartment of Immunology and Microbiology, The Scripps Research Institute, Jupiter, FL 33458, USA.
Dechun ChengDepartment of Immunology and Microbiology, The Scripps Research Institute, Jupiter, FL 33458, USA; Department of Parasitology, Harbin Medical University, Harbin 150081, China.
Michael FarzanDepartment of Immunology and Microbiology, The Scripps Research Institute, Jupiter, FL 33458, USA. Electronic address: mfarzan@scripps.edu.
Scripps Research Institute · US

Funding

Viral escape from AAV expressed transgenesP01AI100263 · NIAID · SCRIPPS FLORIDA · PI GAO, GUANGPING · 2012 to 2016
$11.9M
Therapeutic Use of an Enhanced Form of CD4-IgR37AI091476 · NIAID · UNIVERSITY OF FLORIDA · PI FARZAN, MICHAEL R. · 2016 to 2025
$9.2M
A safety switch for an effective HIV-1 vaccineDP1DA043912 · NIDA · SCRIPPS FLORIDA · PI FARZAN, MICHAEL R. · 2017 to 2021
$4.8M
Therapeutic use of an enhanced form of CD4-IgR01AI091476 · NIAID · SCRIPPS FLORIDA · PI FARZAN, MICHAEL R. · 2011 to 2015
$4.3M
WHICH ISOTYPE OF ECD4-IG MOST EFFECTIVELY SUPPRESSES VIRUS REPLICATION?R44AI124832 · NIAID · EMMUNE, INC · PI ALPERT, MICHAEL DAVID, FARZAN, MICHAEL R. · 2016 to 2018
$2.2M
NIAID NIH HHS P01 AI100263NIAID NIH HHS R01 AI091476NIAID NIH HHS R37 AI091476NIAID NIH HHS R44 AI124832NIDA NIH HHS DP1 DA043912
6 · The paper itself

Abstract

RNA switches that modulate gene expression with small molecules have a number of scientific and clinical applications. Here, we describe a novel class of small regulatory on switches based on the ability of a ligand-bound aptamer to promote stem formation between a microRNA target sequence (miR-T) and a complementary competing strand. Two on switch architectures employing this basic concept were evaluated, differing in the location of a tetracycline aptamer and the region of a miR-21 target sequence (miR-21-T) masked by its competing strand. Further optimizations of miR-21-T and its competing strand resulted in tetracycline-regulated on switches that induced luciferase expression by 19-fold in HeLa cells. A similar switch design based on miR-122-T afforded 7-fold regulation when placed in tandem, indicating that this approach can be extended to additional miR-T. Optimized on switches introduced into adeno-associated virus (AAV) vectors afforded 10-fold regulation of two antiviral proteins in AAV-transduced cells. Our data demonstrate that small-molecule-induced occlusion of a miR-T can be used to conditionally regulate gene expression in mammalian cells and suggest that regulatory switches built on this principle can be used to dose expression of an AAV transgene.

Indexed as

Gene Expression RegulationRNA Interference3' Untranslated Regions5' Untranslated RegionsAptamers, NucleotideBase SequenceBinding SitesCell Line, TumorDependovirusGenetic VectorsHumansLigandsMicroRNAsRiboswitchRNA, MessengerSELEX Aptamer Technique3' Untranslated Regions5' Untranslated RegionsAptamers, NucleotideLigandsMicroRNAsRiboswitchRNA, Messengeradeno-associated virusaptamergene regulationmicroRNA targetriboswitch

Identifiers

PMID29567311
PMCPMC5993935
OpenAlexW2788950211

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.