Evidence map›Paper›PMID 29565995›Full record

ArticlePLoS genetics2018

MKLN1 splicing defect in dogs with lethal acrodermatitis.

Anina Bauer, Vidhya Jagannathan, Sandra Högler, Barbara Richter, Neil A McEwan, Anne Thomas, Edouard Cadieu, Catherine André, Marjo K Hytönen, Hannes Lohi and 5 more

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.6field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
  2. Article
  3. Genes · 2022
    Article
  4. Review
  5. Genes · 2021
    Article
  6. Article
  7. Article
  8. Zinc in Dog Nutrition, Health and Disease: A Review.Animals : an open access journal from MDPI · 2021
    Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Genes · 2019
    Article
  15. AGenes · 2019
    Article
  16. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 8 institutions in 6 countries.

Anina BauerInstitute of Genetics, Vetsuisse Faculty, University of Bern, Bern, Switzerland.
Vidhya JagannathanInstitute of Genetics, Vetsuisse Faculty, University of Bern, Bern, Switzerland.ORCID 0000-0002-8155-0041
Sandra HöglerDepartment of Pathobiology, Institute of Pathology and Forensic Veterinary Medicine, University of Veterinary Medicine Vienna, Vienna, Austria.ORCID 0000-0002-6899-5273
Barbara RichterDepartment of Pathobiology, Institute of Pathology and Forensic Veterinary Medicine, University of Veterinary Medicine Vienna, Vienna, Austria.ORCID 0000-0003-1863-1452
Neil A McEwanDepartment of Small Animal Clinical Sciences, The University of Liverpool, Leahurst Campus, Neston, Cheshire, United Kingdom.
Anne ThomasAntagene, Animal Genetics Laboratory, La Tour de Salvagny, France.ORCID 0000-0001-6901-3844
Edouard CadieuInstitut de Génétique et Développement de Rennes (IGDR), CNRS-UMR6290, Université Rennes1, Rennes, France.
Catherine AndréInstitut de Génétique et Développement de Rennes (IGDR), CNRS-UMR6290, Université Rennes1, Rennes, France.
Marjo K HytönenDepartment of Veterinary Biosciences, University of Helsinki, Helsinki, Finland.ORCID 0000-0003-1976-5874
Hannes LohiDepartment of Veterinary Biosciences, University of Helsinki, Helsinki, Finland.ORCID 0000-0003-1087-5532
Monika M WelleDermFocus, University of Bern, Bern, Switzerland.ORCID 0000-0002-4876-5112
Petra RoosjeDermFocus, University of Bern, Bern, Switzerland.
Cathryn MellershKennel Club Genetics Centre, Animal Health Trust, Kentford, Newmarket, Suffolk, United Kingdom.
Margret L CasalSection of Medical Genetics, Department of Clinical Sciences & Advanced Medicine, School of Veterinary Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America.
Tosso LeebInstitute of Genetics, Vetsuisse Faculty, University of Bern, Bern, Switzerland.ORCID 0000-0003-0553-4880
University of Bern · CHCentre National de la Recherche Scientifique · FRUniversity of Helsinki · FIUniversity of Veterinary Medicine Vienna · ATAnimal Health Trust · GBÉco-Anthropologie · FRUniversity of Liverpool · GBUniversity of Pennsylvania · US

Funding

Referral Ctr-Animal models of human genetic diseaseP40OD010939 · OD · UNIVERSITY OF PENNSYLVANIA · PI CASAL, MARGRET L · 2012 to 2023
$7.9M
NIH HHS P40 OD010939
6 · The paper itself

Abstract

Lethal acrodermatitis (LAD) is a genodermatosis with monogenic autosomal recessive inheritance in Bull Terriers and Miniature Bull Terriers. The LAD phenotype is characterized by poor growth, immune deficiency, and skin lesions, especially at the paws. Utilizing a combination of genome wide association study and haplotype analysis, we mapped the LAD locus to a critical interval of ~1.11 Mb on chromosome 14. Whole genome sequencing of an LAD affected dog revealed a splice region variant in the MKLN1 gene that was not present in 191 control genomes (chr14:5,731,405T>G or MKLN1:c.400+3A>C). This variant showed perfect association in a larger combined Bull Terrier/Miniature Bull Terrier cohort of 46 cases and 294 controls. The variant was absent from 462 genetically diverse control dogs of 62 other dog breeds. RT-PCR analysis of skin RNA from an affected and a control dog demonstrated skipping of exon 4 in the MKLN1 transcripts of the LAD affected dog, which leads to a shift in the MKLN1 reading frame. MKLN1 encodes the widely expressed intracellular protein muskelin 1, for which diverse functions in cell adhesion, morphology, spreading, and intracellular transport processes are discussed. While the pathogenesis of LAD remains unclear, our data facilitate genetic testing of Bull Terriers and Miniature Bull Terriers to prevent the unintentional production of LAD affected dogs. This study may provide a starting point to further clarify the elusive physiological role of muskelin 1 in vivo.

Indexed as

Genes, LethalRNA SplicingAcrodermatitisAnimalsCell Adhesion MoleculesChromosome MappingDog DiseasesDogsExonsGenome-Wide Association StudyHaplotypesIntracellular Signaling Peptides and ProteinsReal-Time Polymerase Chain ReactionCell Adhesion MoleculesIntracellular Signaling Peptides and Proteins

Identifiers

PMID29565995
PMCPMC5863938
OpenAlexW2793983484

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.