Evidence map›Paper›PMID 29565811›Full record

ArticleInternational journal of molecular sciences2018

Imine Deaminase Activity and Conformational Stability of UK114, the Mammalian Member of the Rid Protein Family Active in Amino Acid Metabolism.

Genny Degani, Alberto Barbiroli, Luca Regazzoni, Laura Popolo, Maria Antonietta Vanoni

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. DadY (PA5303) is required for fitness ofMicrobial cell (Graz, Austria) · 2022
    Article
  5. Article
  6. Article
  7. Article
  8. RidA Proteins Protect against Metabolic Damage by Reactive Intermediates.Microbiology and molecular biology reviews : MMBR · 2020
    Review
  9. Article
  10. Review
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Genny DeganiDipartimento di Bioscienze, Università degli Studi di Milano, 20133 Milano, Italy. genny.degani@unimi.it.ORCID 0000-0002-5792-8331
Alberto BarbiroliDipartimento di Scienze per gli Alimenti, la Nutrizione e l'Ambiente, Università degli Studi di Milano, 20133 Milano, Italy. alberto.barbiroli@unimi.it.ORCID 0000-0003-1678-5431
Luca RegazzoniDipartimento di Scienze Farmaceutiche, Università degli Studi di Milano, 20133 Milano, Italy. luca.regazzoni@unimi.it.
Laura PopoloDipartimento di Bioscienze, Università degli Studi di Milano, 20133 Milano, Italy. laura.popolo@unimi.it.ORCID 0000-0002-5590-0167
Maria Antonietta VanoniDipartimento di Bioscienze, Università degli Studi di Milano, 20133 Milano, Italy. maria.vanoni@unimi.it.ORCID 0000-0001-7213-732X
University of Milan · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Reactive intermediate deaminase (Rid) protein family is a recently discovered group of enzymes that is conserved in all domains of life and is proposed to play a role in the detoxification of reactive enamines/imines. UK114, the mammalian member of RidA subfamily, was identified in the early 90s as a component of perchloric acid-soluble extracts from goat liver and exhibited immunomodulatory properties. Multiple activities were attributed to this protein, but its function is still unclear. This work addressed the question of whether UK114 is a Rid enzyme. Biochemical analyses demonstrated that UK114 hydrolyzes α-imino acids generated by l- or d-amino acid oxidases with a preference for those deriving from Ala > Leu = l-Met > l-Gln, whereas it was poorly active on l-Phe and l-His. Circular Dichroism (CD) analyses of UK114 conformational stability highlighted its remarkable resistance to thermal unfolding, even at high urea concentrations. The half-life of heat inactivation at 95 °C, measured from CD and activity data, was about 3.5 h. The unusual conformational stability of UK114 could be relevant in the frame of a future evaluation of its immunogenic properties. In conclusion, mammalian UK114 proteins are RidA enzymes that may play an important role in metabolism homeostasis also in these organisms.

Indexed as

Amino Acid OxidoreductasesAminohydrolasesBacterial ProteinsMolecular ConformationSalmonella entericaAmino Acid OxidoreductasesAminohydrolasesBacterial Proteins2-aminoacrylateD-amino acid oxidaseimino acids">l-amino acid oxidasemetabolic damageRid familythermal stabilityUK114

Identifiers

PMID29565811
PMCPMC5979572
OpenAlexW2792190409

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.