Evidence map›Paper›PMID 29564742›Full record

ArticleBreast cancer research and treatment2018

Immunohistochemistry and alternative FISH testing in breast cancer with HER2 equivocal amplification.

Sally Agersborg, Christopher Mixon, Thanh Nguyen, Sramila Aithal, Sucha Sudarsanam, Forrest Blocker, Lawrence Weiss, Robert Gasparini, Shiping Jiang, Wayne Chen and 2 more

Open access · hybridAbstract read
In one paragraph

Article in Breast cancer research and treatment, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.4field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Sally AgersborgNeoGenomics Laboratories, Research and Development, 31 Columbia, Aliso Viejo, CA, 92656, USA.
Christopher MixonNeoGenomics Laboratories, Research and Development, 31 Columbia, Aliso Viejo, CA, 92656, USA.
Thanh NguyenNeoGenomics Laboratories, Research and Development, 31 Columbia, Aliso Viejo, CA, 92656, USA.
Sramila AithalCancer Treatment Centers of America, Philadelphia, PA, USA.
Sucha SudarsanamNeoGenomics Laboratories, Research and Development, 31 Columbia, Aliso Viejo, CA, 92656, USA.
Forrest BlockerNeoGenomics Laboratories, Research and Development, 31 Columbia, Aliso Viejo, CA, 92656, USA.
Lawrence WeissNeoGenomics Laboratories, Research and Development, 31 Columbia, Aliso Viejo, CA, 92656, USA.
Robert GaspariniNeoGenomics Laboratories, Research and Development, 31 Columbia, Aliso Viejo, CA, 92656, USA.
Shiping JiangNeoGenomics Laboratories, Research and Development, 31 Columbia, Aliso Viejo, CA, 92656, USA.
Wayne ChenNeoGenomics Laboratories, Research and Development, 31 Columbia, Aliso Viejo, CA, 92656, USA.
Gregory HessSymphony Health, Conshohocken, PA, USA.
Maher AlbitarNeoGenomics Laboratories, Research and Development, 31 Columbia, Aliso Viejo, CA, 92656, USA. maheralbitar@gmail.com.ORCID http://orcid.org/0000-0001-7661-9537
NeoGenomics (United States) · USCancer Treatment Centers of America · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeWhile HER2 testing is well established in directing appropriate treatment for breast cancer, a small percentage of cases show equivocal results by immunohistochemistry (IHC) and fluorescence in situ hybridization (FISH). Alternative probes may be used in equivocal cases. We present a single community-based institution's experience in further evaluating these cases. PATIENTS AND

methodsBetween 2014 and 2016, 4255 samples were submitted for HER2 amplification testing by alternative probes, TP53, RAI1, and RARA. Of the patients tested by FISH, 505/3908 (12.9%) also had IHC data.

resultsMost (73.9%) FISH equivocal cases remained equivocal after IHC testing. However, 50.5% of equivocal cases were classified as HER2 amplified by alternative probes. Most cases were positive by more than one probe: 78% of positive cases by RAI1 and 73.9% by TP53. There was a significant difference between IHC and FISH alternative testing (p < 0.0001) among the equivocal cases by conventional FISH testing, 44% of IHC negative cases became positive while 36% of the positive IHC cases became negative by alternative FISH testing. Available data showed that 41% of patients were treated with palbociclib and were positive by alternative FISH.

conclusionThe prevalence of double HER2 equivocal cases and the discrepancy between IHC and alternative FISH testing suggest that FISH alternative testing using both RAI1 and TP53 probes is necessary for conclusive classification. Because almost half of FISH equivocal cases converted to HER2 amplified upon alternative testing, clinical studies to determine the benefit of anti-HER2 therapy in these patients are urgently needed.

Indexed as

Biomarkers, TumorImmunohistochemistryIn Situ Hybridization, FluorescenceBreast NeoplasmsErb-b2 Receptor Tyrosine KinasesFemaleGene AmplificationHumansReceptors, EstrogenReceptors, ProgesteroneBiomarkers, TumorErb-b2 Receptor Tyrosine KinasesReceptors, EstrogenReceptors, ProgesteroneBreast cancerEquivocalFISHHER2IHC

Identifiers

PMID29564742
PMCPMC5999182
OpenAlexW2794269934

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.