Evidence map›Paper›PMID 29564081›Full record

ArticleAoB PLANTS2018

Patterns of alternative splicing vary between species during heat stress.

Sumetha Kannan, Gillian Halter, Tanya Renner, Elizabeth R Waters

Abstract read
In one paragraph

Article in AoB PLANTS, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Interplays betweenInternational journal of molecular sciences · 2023
    Article
  5. Article
  6. Review
  7. Review
  8. Article
  9. Alternative Splicing and Its Roles in Plant Metabolism.International journal of molecular sciences · 2022
    Review
  10. Review
  11. Article
  12. Review
  13. Review
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. TheFrontiers in plant science · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Sumetha KannanDepartment of Biology, San Diego State University, Campanile Drive, San Diego, CA, USA.
Gillian HalterDepartment of Biology, San Diego State University, Campanile Drive, San Diego, CA, USA.
Tanya RennerDepartment of Biology, San Diego State University, Campanile Drive, San Diego, CA, USA.
Elizabeth R WatersDepartment of Biology, San Diego State University, Campanile Drive, San Diego, CA, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plants have evolved a variety of mechanisms to respond and adapt to abiotic stress. High temperature stress induces the heat shock response. During the heat shock response a large number of genes are up-regulated, many of which code for chaperone proteins that prevent irreversible protein aggregation and cell death. However, it is clear that heat shock is not the only mechanism involved in the plant heat stress response. Alternative splicing (AS) is also important during heat stress since this post-transcriptional regulatory mechanism can produce significant transcriptome and proteome variation. In this study, we examine AS during heat stress in the model species

Indexed as

Alternative splicingArabidopsis thalianaBoechera depauperatadifferential gene expressionheat stressRNA-seq

Identifiers

PMID29564081
PMCPMC5846289

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.