ArticleScientific reports2018
Comparative transcriptome analysis reveals phytohormone signalings, heat shock module and ROS scavenger mediate the cold-tolerance of rubber tree.
Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.
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18 citing papers in PubMed.
- Transcriptomic Analysis of Differential Gene Expression inPlants (Basel, Switzerland) · 2025Article
- Jasmonic Acid-Mediated Antioxidant Defense Confers Chilling Tolerance in Okra (Plants (Basel, Switzerland) · 2025Article
- Genetic diversity analysis and core germplasm bank construction in cold resistant germplasm of rubber trees (Hevea brasiliensis).Scientific reports · 2024Article
- Integrated transcriptomic and metabolomic analysis provides insights into cold tolerance in lettuce (Lactuca sativa L.).BMC plant biology · 2024Article
- Comparative transcriptomics of the chilling stress response in two Asian mangrove species, Bruguiera gymnorhiza and Rhizophora apiculata.Tree physiology · 2024Article
- Integrative analysis of transcriptome and metabolome reveals how ethylene increases natural rubber yield inFrontiers in plant science · 2024Article
- The rubber tree kinome: Genome-wide characterization and insights into coexpression patterns associated with abiotic stress responses.Frontiers in plant science · 2023Article
- Transcriptome Analysis of Low-Temperature-Treated Tetraploid YellowLife (Basel, Switzerland) · 2022Article
- Insights to the superoxide dismutase genes and its roles in3 Biotech · 2022Article
- Article
- Gene-coexpression network analysis identifies specific modules and hub genes related to cold stress in rice.BMC genomics · 2022Article
- Transcriptomics integrated with widely targeted metabolomics reveals the cold resistance mechanism inFrontiers in plant science · 2022Article
- Can Forest Trees Cope with Climate Change?-Effects of DNA Methylation on Gene Expression and Adaptation to Environmental Change.International journal of molecular sciences · 2021Review
- Role of jasmonic acid in plants: the molecular point of view.Plant cell reports · 2021Review
- Genomic Characteristics and Comparative Genomics Analysis of Two ChineseJournal of fungi (Basel, Switzerland) · 2021Article
- Unravelling Rubber Tree Growth by Integrating GWAS and Biological Network-Based Approaches.Frontiers in plant science · 2021Article
- Regulatory Potential of bHLH-Type Transcription Factors on the Road to Rubber Biosynthesis inPlants (Basel, Switzerland) · 2020Article
- Deep expression analysis reveals distinct cold-response strategies in rubber tree (Hevea brasiliensis).BMC genomics · 2019Article
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10 authors.
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Abstract
Two contrasting cold response rubber tree clones, the cold-resistant '93-114' and cold-sensitive 'Reken501', were subject to a global transcriptome response assessing via high-throughput RNA-seq technique and comprehensive bioinformatics analysis using the referenced rubber tree genome with the purpose of exploring the potential molecular cues underlying the tolerance of rubber trees to cold stress. As a result, a total of 1919 genes had significantly higher expression, while 2929 genes had significantly lower expression in '93-114' than in 'Reken501' without cold stress. Upon cold stress, the numbers of genes with significantly higher expression decreased to 1501 at 1 h treatment and to 1285 at 24 h treatment in '93-114' than that of 'Reken501', conversely, the numbers of genes with significantly lower expression increased to 7567 at 1 h treatment and to 5482 at 24 h treatment. Functional annotation of the differentially expressed genes between '93-114' and 'Reken501' suggests that down-regulation of auxin and ethylene signaling and activation of heat shock module and ROS scavengers is a primary strategy for H. brasiliensis to cope with cold stress. Our identified vital differentially expressed genes may be beneficial for elucidation of the molecular mechanisms underlying cold tolerance and for genetic improvement of H. brasiliensis clones.
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