Evidence map›Paper›PMID 29563249›Full record

ArticleRNA (New York, N.Y.)2018

Balance between MAT2A intron detention and splicing is determined cotranscriptionally.

Kathryn E Pendleton, Sung-Kyun Park, Olga V Hunter, Stefan M Bresson, Nicholas K Conrad

Open access · bronzeAbstract read
In one paragraph

Article in RNA (New York, N.Y.), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 43 citations in OpenAlex.

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  17. Let It Go: HIV-1Journal of virology · 2021
    Review
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Kathryn E PendletonDepartment of Microbiology, UT Southwestern Medical Center, Dallas, Texas 75390, USA.
Sung-Kyun ParkDepartment of Microbiology, UT Southwestern Medical Center, Dallas, Texas 75390, USA.
Olga V HunterDepartment of Microbiology, UT Southwestern Medical Center, Dallas, Texas 75390, USA.
Stefan M BressonDepartment of Microbiology, UT Southwestern Medical Center, Dallas, Texas 75390, USA.
Nicholas K ConradDepartment of Microbiology, UT Southwestern Medical Center, Dallas, Texas 75390, USA.
Southwestern Medical Center · US

Funding

MECHANISMS OF DRUG ACTION AND DISPOSITIONT32GM007062 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI MANGELSDORF, DAVID J · 1985 to 2020
$7.4M
Mechanisms of KSHV posttranscriptional gene regulationR01AI123165 · NIAID · UT SOUTHWESTERN MEDICAL CENTER · PI CONRAD, NICHOLAS K · 2016 to 2025
$4.5M
NIAID NIH HHS R01 AI123165NIGMS NIH HHS T32 GM007062
6 · The paper itself

Abstract

Transcriptome analysis of human cells has revealed that intron retention controls the expression of a large number of genes with diverse cellular functions. Detained introns (DI) constitute a subgroup of transcripts with retained introns that are not exported to the cytoplasm but instead remain in the nucleus. Previous studies reported that the splicing of DIs in the CLK1 transcript is post-transcriptionally induced to produce mature mRNA in the absence of new transcription. Thus, CLK1-DI serves as a precursor or "reservoir" for the CLK1 mRNA. However, whether this is a universal mechanism for gene regulation by intron detention remains unknown. The

Indexed as

IntronsRNA SplicingTranscription, GeneticCell NucleusGene Expression RegulationHumansMethionine AdenosyltransferaseRNA, MessengerRNA PrecursorsS-AdenosylmethionineMAT2A protein, humanMethionine AdenosyltransferaseRNA, MessengerRNA PrecursorsS-Adenosylmethionineintron detentionintron retentionMAT2AS-adenosylmethioninesplicing

Identifiers

PMID29563249
PMCPMC5959247
OpenAlexW2794361994

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.