Evidence map›Paper›PMID 29563230›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2018

Analysis of oscillatory rocking curve by dynamical diffraction in protein crystals.

Ryo Suzuki, Haruhiko Koizumi, Keiichi Hirano, Takashi Kumasaka, Kenichi Kojima, Masaru Tachibana

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.7field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 15 citations in OpenAlex.

  1. Existence of twisting in dislocation-free protein single crystals.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 5 institutions in 1 country.

Ryo SuzukiGraduate School of Nanobioscience, Yokohama City University, 236-0027 Yokohama, Japan.ORCID 0000-0002-1881-696X
Haruhiko KoizumiInstitute for Materials Research, Tohoku University, 980-8577 Sendai, Japan.ORCID 0000-0001-8355-0320
Keiichi HiranoInstitute of Materials Structure Science, High Energy Accelerator Research Organization, Tsukuba, 305-0801 Ibaraki, Japan.
Takashi KumasakaJapan Synchrotron Radiation Research Institute, SPring-8, Sayo-cho, Sayo-gun, 679-5198 Hyogo, Japan.ORCID 0000-0001-9289-1557
Kenichi KojimaDepartment of Education, Yokohama Soei University, Midori-ku, 226-0015 Yokohama, Japan.
Masaru TachibanaGraduate School of Nanobioscience, Yokohama City University, 236-0027 Yokohama, Japan; tachiban@yokohama-cu.ac.jp.
Yokohama City University · JPHigh Energy Accelerator Research Organization · JPSPring-8 · JPTohoku University · JPYokohama Soei University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

High-quality protein crystals meant for structural analysis by X-ray diffraction have been grown by various methods. The observation of dynamical diffraction in protein crystals is an interesting topic because dynamical diffraction generally occurs in perfect crystals such as Si crystals. However, to our knowledge, there is no report yet on protein crystals showing clear dynamical diffraction. We wonder whether the perfection of protein crystals might still be low compared with that of high-quality Si crystals. Here, we present observations of the oscillatory profile of rocking curves for protein crystals such as glucose isomerase crystals. The oscillatory profiles are in good agreement with those predicted by the dynamical theory of diffraction. We demonstrate that dynamical diffraction occurs even in protein crystals. This suggests the possibility of the use of dynamical diffraction for the determination of the structure and charge density of proteins.

Indexed as

Aldose-Ketose IsomerasesBiochemistryBiomechanical PhenomenaCrystallizationCrystallography, X-RayProtein ConformationStreptomycetaceaeAldose-Ketose Isomerasesxylose isomerasedynamical diffractionglucose isomeraseprotein crystalrocking curveX-ray topography

Identifiers

PMID29563230
PMCPMC5889653
OpenAlexW2790118372

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.