Evidence map›Paper›PMID 29562592›Full record

ArticleMolecules (Basel, Switzerland)2018

Novel Semisynthetic Derivatives of Bile Acids as Effective Tyrosyl-DNA Phosphodiesterase 1 Inhibitors.

Oksana V Salomatina, Irina I Popadyuk, Alexandra L Zakharenko, Olga D Zakharova, Dmitriy S Fadeev, Nina I Komarova, Jóhannes Reynisson, H John Arabshahi, Raina Chand, Konstantin P Volcho and 2 more

Open access · goldAbstract read
In one paragraph

Article in Molecules (Basel, Switzerland), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.9field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Physiology and Physical Chemistry of Bile Acids.International journal of molecular sciences · 2021
    Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
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  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 2 countries.

Oksana V SalomatinaN.N. Vorozhtsov Novosibirsk Institute of Organic Chemistry, SB RAS, acad. Lavrentjev ave. 9, Novosibirsk 630090, Russia. ana@nioch.nsc.ru.
Irina I PopadyukN.N. Vorozhtsov Novosibirsk Institute of Organic Chemistry, SB RAS, acad. Lavrentjev ave. 9, Novosibirsk 630090, Russia. popadyuk@nioch.nsc.ru.
Alexandra L ZakharenkoNovosibirsk Institute of Chemical Biology and Fundamental Medicine, SB RAS, acad. Lavrentjev ave. 8, Novosibirsk 630090, Russia. sashaz@niboch.nsc.ru.
Olga D ZakharovaNovosibirsk Institute of Chemical Biology and Fundamental Medicine, SB RAS, acad. Lavrentjev ave. 8, Novosibirsk 630090, Russia. isar@niboch.nsc.ru.
Dmitriy S FadeevN.N. Vorozhtsov Novosibirsk Institute of Organic Chemistry, SB RAS, acad. Lavrentjev ave. 9, Novosibirsk 630090, Russia. dsf@nioch.nsc.ru.
Nina I KomarovaN.N. Vorozhtsov Novosibirsk Institute of Organic Chemistry, SB RAS, acad. Lavrentjev ave. 9, Novosibirsk 630090, Russia. komar@nioch.nsc.ru.
Jóhannes ReynissonSchool of Chemical Sciences, University of Auckland, Auckland 1142, New Zealand. j.reynisson@auckland.ac.nz.ORCID 0000-0003-4174-9512
H John ArabshahiSchool of Chemical Sciences, University of Auckland, Auckland 1142, New Zealand. j.arabshahi@auckland.ac.nz.
Raina ChandSchool of Chemical Sciences, University of Auckland, Auckland 1142, New Zealand. rcha387@aucklanduni.ac.nz.
Konstantin P VolchoN.N. Vorozhtsov Novosibirsk Institute of Organic Chemistry, SB RAS, acad. Lavrentjev ave. 9, Novosibirsk 630090, Russia. volcho@nioch.nsc.ru.ORCID 0000-0002-4083-9324
Nariman F SalakhutdinovN.N. Vorozhtsov Novosibirsk Institute of Organic Chemistry, SB RAS, acad. Lavrentjev ave. 9, Novosibirsk 630090, Russia. anvar@nioch.nsc.ru.
Olga I LavrikNovosibirsk Institute of Chemical Biology and Fundamental Medicine, SB RAS, acad. Lavrentjev ave. 8, Novosibirsk 630090, Russia. lavrik@niboch.nsc.ru.
Novosibirsk Institute of Organic Chemistry · RUNovosibirsk State University · RUUniversity of Auckland · NZInstitute of Chemical Biology and Fundamental Medicine · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

An Important task in the treatment of oncological and neurodegenerative diseases is the search for new inhibitors of DNA repair system enzymes. Tyrosyl-DNA phosphodiesterase 1 (Tdp1) is one of the DNA repair system enzymes involved in the removal of DNA damages caused by topoisomerase I inhibitors. Thus, reducing the activity of Tdp1 can increase the effectiveness of currently used anticancer drugs. We describe here a new class of semisynthetic small molecule Tdp1 inhibitors based on the bile acid scaffold that were originally identified by virtual screening. The influence of functional groups of bile acids (hydroxy and acetoxy groups in the steroid framework and amide fragment in the side chain) on inhibitory activity was investigated. In vitro studies demonstrate the ability of the semisynthetic derivatives to effectively inhibit Tdp1 with IC

Indexed as

Bile Acids and SaltsBinding SitesDrug Evaluation, PreclinicalHCT116 CellsHumansMCF-7 CellsMolecular Docking SimulationNiacinamidePhosphodiesterase InhibitorsPhosphoric Diester HydrolasesTryptaminesBile Acids and SaltsNiacinamidePhosphodiesterase InhibitorsPhosphoric Diester HydrolasestryptamideTryptaminestyrosyl-DNA phosphodiesteraseamidecancerchenodeoxycholic aciddeoxycholic acidmolecular modellingTdp1 inhibitortumorursodeoxycholic acidvirtual screening

Identifiers

PMID29562592
PMCPMC6017735
OpenAlexW2794010685

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.