Evidence map›Paper›PMID 29561792›Full record

ArticleAntibiotics (Basel, Switzerland)2018

High-Throughput Sequencing Analysis of the Actinobacterial Spatial Diversity in Moonmilk Deposits.

Marta Maciejewska, Magdalena Całusińska, Luc Cornet, Delphine Adam, Igor S Pessi, Sandrine Malchair, Philippe Delfosse, Denis Baurain, Hazel A Barton, Monique Carnol and 1 more

Abstract read
In one paragraph

Article in Antibiotics (Basel, Switzerland), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
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  7. Actinomycetes: The Antibiotics Producers.Antibiotics (Basel, Switzerland) · 2019
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Marta MaciejewskaInBioS-Centre for Protein Engineering, Institut de Chimie B6a, University of Liège, B-4000 Liège, Belgium. maciejewska.m@wp.pl.
Magdalena CałusińskaEnvironmental Research and Innovation Department, Luxembourg Institute of Science and Technology, Belvaux, Luxembourg. magdalena.calusinska@list.lu.ORCID 0000-0003-2270-2217
Luc CornetInBioS-PhytoSYSTEMS, Eukaryotic Phylogenomics, University of Liège, B-4000 Liège, Belgium. luc.cornet@uliege.be.
Delphine AdamInBioS-Centre for Protein Engineering, Institut de Chimie B6a, University of Liège, B-4000 Liège, Belgium. delphine.adam@doct.ulg.ac.be.
Igor S PessiInBioS-Centre for Protein Engineering, Institut de Chimie B6a, University of Liège, B-4000 Liège, Belgium. ispessi@alumni.ulg.ac.be.
Sandrine MalchairInBioS-Plant and Microbial Ecology, Botany B22, University of Liège, B-4000 Liège, Belgium. S.Malchair@uliege.be.
Philippe DelfosseEnvironmental Research and Innovation Department, Luxembourg Institute of Science and Technology, Belvaux, Luxembourg. philippe.delfosse@list.lu.
Denis BaurainInBioS-PhytoSYSTEMS, Eukaryotic Phylogenomics, University of Liège, B-4000 Liège, Belgium. Denis.Baurain@uliege.be.
Hazel A BartonDepartment of Biology, University of Akron, Akron, OH 44325, USA. bartonh@uakron.edu.
Monique CarnolInBioS-Plant and Microbial Ecology, Botany B22, University of Liège, B-4000 Liège, Belgium. m.carnol@uliege.be.
Sébastien RigaliInBioS-Centre for Protein Engineering, Institut de Chimie B6a, University of Liège, B-4000 Liège, Belgium. srigali@uliege.be.ORCID 0000-0003-4022-7325

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Moonmilk are cave carbonate deposits that host a rich microbiome, including antibiotic-producing Actinobacteria, making these speleothems appealing for bioprospecting. Here, we investigated the taxonomic profile of the actinobacterial community of three moonmilk deposits of the cave "Grotte des Collemboles" via high-throughput sequencing of 16S rRNA amplicons. Actinobacteria was the most common phylum after Proteobacteria, ranging from 9% to 23% of the total bacterial population. Next to actinobacterial operational taxonomic units (OTUs) attributed to uncultured organisms at the genus level (~44%), we identified 47 actinobacterial genera with

Indexed as

ActinobacteriaantibioticsgeomicrobiologyIllumina sequencingmicrobiome diversityStreptomyces

Identifiers

PMID29561792
PMCPMC6023079

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.