Evidence map›Paper›PMID 29560592›Full record

ArticleEnvironmental science and pollution research international2018

Detection and molecular characterization of Cryptosporidium species and Giardia assemblages in two watersheds in the metropolitan region of São Paulo, Brazil.

Ronalda Silva de Araújo, Bruna Aguiar, Milena Dropa, Maria Tereza Pepe Razzolini, Maria Inês Zanoli Sato, Marcelo de Souza Lauretto, Ana Tereza Galvani, José Antônio Padula, Glavur Rogério Matté, Maria Helena Matté

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Article in Environmental science and pollution research international, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Review
  2. Detection ofMicroorganisms · 2022
    Review
  3. Multilocus Genotyping ofPathogens (Basel, Switzerland) · 2021
    Article
  4. Review
  5. Review
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Ronalda Silva de AraújoFaculdade de Saúde Pública, Universidade de São Paulo, Av. Doutor Arnaldo 715, São Paulo, SP, 01246-904, Brazil.
Bruna AguiarFaculdade de Saúde Pública, Universidade de São Paulo, Av. Doutor Arnaldo 715, São Paulo, SP, 01246-904, Brazil.
Milena DropaFaculdade de Saúde Pública, Universidade de São Paulo, Av. Doutor Arnaldo 715, São Paulo, SP, 01246-904, Brazil.
Maria Tereza Pepe RazzoliniFaculdade de Saúde Pública, Universidade de São Paulo, Av. Doutor Arnaldo 715, São Paulo, SP, 01246-904, Brazil.
Maria Inês Zanoli SatoCompanhia Ambiental do Estado de São Paulo - CETESB, São Paulo, Brazil.
Marcelo de Souza LaurettoEscola de Artes, Ciências e Humanidades - EACH, Universidade de São Paulo, São Paulo, Brazil.
Ana Tereza GalvaniCompanhia Ambiental do Estado de São Paulo - CETESB, São Paulo, Brazil.
José Antônio PadulaCompanhia Ambiental do Estado de São Paulo - CETESB, São Paulo, Brazil.
Glavur Rogério MattéFaculdade de Saúde Pública, Universidade de São Paulo, Av. Doutor Arnaldo 715, São Paulo, SP, 01246-904, Brazil.
Maria Helena MattéFaculdade de Saúde Pública, Universidade de São Paulo, Av. Doutor Arnaldo 715, São Paulo, SP, 01246-904, Brazil. mhmatte.usp@gmail.com.

Funding

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior - CAPES 300642/2013-0Fundação de Amparo à Pesquisa do Estado de São Paulo - FAPESP Sabesp/Fapesp # 2010/50797-4
6 · The paper itself

Abstract

Cryptosporidium and Giardia are associated with cases of water and foodborne outbreaks in the world. This study included 50 samples of surface raw water collected from two watersheds in the state of São Paulo, Brazil. The isolation of (oo)cysts was performed in accordance with the U.S. Environmental Protection Agency's methods 1623 and genotypic characterization and quantification were carried out by Nested PCR and qPCR assays based on 18S rRNA and gdh genes, respectively. U.S. EPA 1623 method showed the presence of (oo)cysts in 40% ([Formula: see text] = 0.10 oocysts/L) and 100% ([Formula: see text] = 7.6 cysts/L) of samples from São Lourenço River, respectively, and 24% ([Formula: see text] = 0.8 oocysts/L) and 60% ([Formula: see text] = 1.64 cysts/L) of Guarapiranga Reservoir, respectively. The qPCR assay detected C. hominis/parvum in 52% (0.06 to 1.85 oocysts/L) of São Lourenço River and 64% (0.09 to 1.4 oocysts/L) of Guarapiranga Reservoir samples. Presence/absence test for Giardia intestinalis was positive in 92% of São Lourenço River and 8% of Guarapiranga Reservoir samples. The assemblage A was detected in 16% (0.58 to 2.67 cysts/L) in São Lourenço River and no positive samples were obtained for assemblage B in both water bodies. The characterization of anthroponotic species C. parvum/hominis, G. intestinalis, and assemblage A was valuable in the investigation of possible sources of contamination in the watersheds studied confirming the need of expanding environmental monitoring measures for protection of these water sources in our country.

Indexed as

AnimalsBrazilCitiesCryptosporidiumEnvironmental MonitoringGenotypeGiardiaOocystsRiversRNA, Ribosomal, 18SRNA, Ribosomal, 18SCryptosporidiumEnvironmental surveillanceGiardiaPCRPublic healthqPCRWatersheds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.