Evidence map›Paper›PMID 29560102›Full record

ArticleOncotarget2018

Detection of circulating tumor DNA in patients with osteosarcoma.

David M Barris, Shoshana B Weiner, Robert A Dubin, Michael Fremed, Xusheng Zhang, Sajida Piperdi, Wendong Zhang, Shahina Maqbool, Jonathan Gill, Michael Roth and 4 more

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
2.0field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 57 citations in OpenAlex.

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  13. Minimal Residual Disease in Metastatic Soft Tissue Sarcoma.Current treatment options in oncology · 2025
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 1 country.

David M Barris *Department of Genetics and Department of Pediatrics, Albert Einstein College of Medicine, Bronx, NY, USA.
Shoshana B Weiner *Department of Genetics and Department of Pediatrics, Albert Einstein College of Medicine, Bronx, NY, USA.
Robert A DubinComputational Genomics Core, Albert Einstein College of Medicine, Bronx, NY, USA.
Michael FremedDepartment of Genetics and Department of Pediatrics, Albert Einstein College of Medicine, Bronx, NY, USA.
Xusheng ZhangComputational Genomics Core, Albert Einstein College of Medicine, Bronx, NY, USA.
Sajida PiperdiDepartment of Pediatrics, Montefiore Medical Center, Bronx, NY, USA.
Wendong ZhangDepartment of Pediatrics, Montefiore Medical Center, Bronx, NY, USA.
Shahina MaqboolDepartment of Genetics and Department of Pediatrics, Albert Einstein College of Medicine, Bronx, NY, USA.
Jonathan GillDivision of Pediatrics, University of Texas MD Anderson Cancer Center, Houston, Texas, USA.
Michael RothDivision of Pediatrics, University of Texas MD Anderson Cancer Center, Houston, Texas, USA.
Bang HoangDepartment of Orthopedic Surgery, Montefiore Medical Center, Bronx, NY, USA.
David GellerDepartment of Orthopedic Surgery, Montefiore Medical Center, Bronx, NY, USA.
Richard GorlickDivision of Pediatrics, University of Texas MD Anderson Cancer Center, Houston, Texas, USA.
Daniel A WeiserDivision of Hematology/Oncology, Children's Hospital at Montefiore, Bronx, NY, USA.
Albert Einstein College of Medicine · USMontefiore Medical Center · USThe University of Texas MD Anderson Cancer Center · USChildren's Hospital at Montefiore · US

Funding

Core-010UL1TR001073 · NCATS · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI KELLER, MARLA J, SHAMOON, HARRY · 2013 to 2017
$21.3M
NCATS NIH HHS UL1 TR001073
6 · The paper itself

Abstract

Identification and quantification of somatic alterations in plasma-derived, circulating tumor DNA (ctDNA) is gaining traction as a non-invasive and cost effective method of disease monitoring in cancer patients, particularly to evaluate response to treatment and monitor for disease recurrence. To our knowledge, genetic analysis of ctDNA in osteosarcoma has not yet been studied. To determine whether somatic alterations can be detected in ctDNA and perhaps applied to patient management in this disease, we collected germline, tumor, and serial plasma samples from pediatric, adolescent, and young adult patients with osteosarcoma and used targeted Next Generation Sequencing (NGS) to identify somatic single nucleotide variants (SNV), insertions and deletions (INDELS), and structural variants (SV) in 7 genes commonly mutated in osteosarcoma. We demonstrate that patient-specific somatic alterations identified through comparison of tumor-germline pairs can be detected and quantified in cell-free DNA of osteosarcoma patients.

Indexed as

circulating tumor DNANext Generation Sequencingosteosarcomatargeted sequencingtargeted therapy

Identifiers

PMID29560102
PMCPMC5849166
OpenAlexW2791649658

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.