ArticleFrontiers in plant science2018
Water Deficit and Salinity Stress Reveal Many Specific QTL for Plant Growth and Fruit Quality Traits in Tomato.
Article in Frontiers in plant science, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers, 1 of them a synthesis that pooled it.
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Who cites it
33 citing papers in PubMed, 1 synthesis or guideline pooled it, 109 citations in OpenAlex.
- Drought-responsive genes in tomato: meta-analysis of gene expression using machine learning.Scientific reports · 2023Pooled it
- From greenhouse conditions to the field: stability of tolerance to water deficit in the tomato wild relatives Solanum lycopersicum var. cerasiforme and Solanum pimpinellifolium.BMC plant biology · 2025Article
- New QTLs involved in the control of stigma position in tomato.BMC plant biology · 2025Article
- Optimizing Tomato (Plants (Basel, Switzerland) · 2024Article
- Unveiling pepper immunity's robustness to temperature shifts: insights for empowering future crops.Horticulture research · 2024Article
- Growth and antioxidant responses to water stress in eggplant MAGIC population parents, FBMC plant biology · 2024Article
- Meta-QTL and Candidate Gene Analyses of Agronomic Salt Tolerance and Related Traits in an RIL Population Derived fromInternational journal of molecular sciences · 2024Article
- Genome-Wide Association Study (GWAS) for Identifying SNPs and Genes Related to Phosphate-Induced Phenotypic Traits in Tomato (Plants (Basel, Switzerland) · 2024Article
- Mapping phenotypic performance and novel SNPs for cold tolerance in tomato (Solanum lycopersicum) genotypes through GWAS and population genetics.BMC genomic data · 2024Article
- Revitalizing agriculture: next-generation genotyping and -omics technologies enabling molecular prediction of resilient traits in the Solanaceae family.Frontiers in plant science · 2024Review
- Integrated Bulk Segregant Analysis, Fine Mapping, and Transcriptome Revealed QTLs and Candidate Genes Associated with Drought Adaptation in Wild Watermelon.International journal of molecular sciences · 2023Article
- Diversity and genetic architecture of agro-morphological traits in a core collection of European traditional tomato.Journal of experimental botany · 2023Article
- Moderate Salinity of Nutrient Solution Improved the Nutritional Quality and Flavor of Hydroponic Chinese Chives (Foods (Basel, Switzerland) · 2023Article
- Instigating prevalent abiotic stress resilience in crop by exogenous application of phytohormones and nutrient.Frontiers in plant science · 2023Review
- Spatiotemporal dynamics of the tomato fruit transcriptome under prolonged water stress.Plant physiology · 2022Article
- Identification and Characterization of Malate Dehydrogenases in Tomato (International journal of molecular sciences · 2022Article
- Productive and Physico-Chemical Parameters of Tomato Fruits Submitted to Fertigation Doses with Water Treated with Very Low-Frequency Electromagnetic Resonance Fields.Plants (Basel, Switzerland) · 2022Article
- HKT1;1 and HKT1;2 NaInternational journal of molecular sciences · 2022Article
- Drought tolerance improvement in3 Biotech · 2022Review
- The Halophyte SpeciesPlants (Basel, Switzerland) · 2022Article
Corrections and comments
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Authors and funding
5 authors at 3 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Quality is a key trait in plant breeding, especially for fruit and vegetables. Quality involves several polygenic components, often influenced by environmental conditions with variable levels of genotype × environment interaction that must be considered in breeding strategies aiming to improve quality. In order to assess the impact of water deficit and salinity on tomato fruit quality, we evaluated a multi-parent advanced generation intercross (MAGIC) tomato population in contrasted environmental conditions over 2 years, one year in control vs. drought condition and the other in control vs. salt condition. Overall 250 individual lines from the MAGIC population-derived from eight parental lines covering a large diversity in cultivated tomato-were used to identify QTL in both experiments for fruit quality and yield component traits (fruit weight, number of fruit, Soluble Solid Content, firmness), phenology traits (time to flower and ripe) and a vegetative trait, leaf length. All the traits showed a large genotype variation (33-86% of total phenotypic variation) in both experiments and high heritability whatever the year or treatment. Significant genotype × treatment interactions were detected for five of the seven traits over the 2 years of experiments. QTL were mapped using 1,345 SNP markers. A total of 54 QTL were found among which 15 revealed genotype × environment interactions and 65% (35 QTL) were treatment specific. Confidence intervals of the QTL were projected on the genome physical map and allowed identifying regions carrying QTL co-localizations, suggesting pleiotropic regulation. We then applied a strategy for candidate gene detection based on the high resolution mapping offered by the MAGIC population, the allelic effect of each parental line at the QTL and the sequence information of the eight parental lines.
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