Evidence map›Paper›PMID 29555761›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2018

Dimeric sorting code for concentrative cargo selection by the COPII coat.

Chao Nie, Huimin Wang, Rui Wang, David Ginsburg, Xiao-Wei Chen

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Chao NieState Key Laboratory of Membrane Biology, Peking University, Beijing 100871, China.
Huimin WangCenter for Life Sciences, Peking University, Beijing 100871, China.
Rui WangCenter for Life Sciences, Peking University, Beijing 100871, China.
David GinsburgLife Sciences Institute, University of Michigan, Ann Arbor, MI 48109; ginsburg@umich.edu xiaowei_chen@pku.edu.cn.ORCID 0000-0002-6436-8942
Xiao-Wei ChenState Key Laboratory of Membrane Biology, Peking University, Beijing 100871, China; ginsburg@umich.edu xiaowei_chen@pku.edu.cn.

Funding

TRANSGENIC MODELS FOR THE STUDY OF FACTOR V FUNCTIONP01HL057346 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI KAUFMAN, RANDAL J. · 1997 to 2013
$19.9M
The Molecular Genetics of HemostasisR35HL135793 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI GINSBURG, DAVID · 2017 to 2023
$4.1M
Molecular Genetic Study of von Willebrand FactorR01HL039693 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI GINSBURG, DAVID · 1989 to 2016
$2.4M
Howard Hughes Medical InstituteNHLBI NIH HHS P01 HL057346NHLBI NIH HHS R01 HL039693NHLBI NIH HHS R35 HL135793
6 · The paper itself

Abstract

The flow of cargo vesicles along the secretory pathway requires concerted action among various regulators. The COPII complex, assembled by the activated SAR1 GTPases on the surface of the endoplasmic reticulum, orchestrates protein interactions to package cargos and generate transport vesicles en route to the Golgi. The dynamic nature of COPII, however, hinders analysis with conventional biochemical assays. Here we apply proximity-dependent biotinylation labeling to capture the dynamics of COPII transport in cells. When SAR1B was fused with a promiscuous biotin ligase, BirA*, the fusion protein SAR1B-BirA* biotinylates and thus enables the capture of COPII machinery and cargos in a GTP-dependent manner. Biochemical and pulse-chase imaging experiments demonstrate that the COPII coat undergoes a dynamic cycle of engagement-disengagement with the transmembrane cargo receptor LMAN1/ERGIC53. LMAN1 undergoes a process of concentrative sorting by the COPII coat, via a dimeric sorting code generated by oligomerization of the cargo receptor. Similar oligomerization events have been observed with other COPII sorting signals, suggesting that dimeric/multimeric sorting codes may serve as a general mechanism to generate selectivity of cargo sorting.

Indexed as

COP-Coated VesiclesEndoplasmic ReticulumGolgi ApparatusHeLa CellsHumansMannose-Binding LectinsMembrane ProteinsMutationProtein MultimerizationProtein TransportSecretory PathwayLMAN1 protein, humanMannose-Binding LectinsMembrane Proteinscargo receptorcargo sortingCOPIILMAN1proximity-dependent biotinylation

Identifiers

PMID29555761
PMCPMC5889621

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.