Evidence map›Paper›PMID 29553330›Full record

ArticleEmerging infectious diseases2018

Genomic Surveillance of 4CMenB Vaccine Antigenic Variants among Disease-Causing Neisseria meningitidis Isolates, United Kingdom, 2010-2016.

Charlene M C Rodrigues, Jay Lucidarme, Ray Borrow, Andrew Smith, J Claire Cameron, E Richard Moxon, Martin C J Maiden

Open access · diamondAbstract readHistorical Article
In one paragraph

Article in Emerging infectious diseases, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 25 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 1 country.

Charlene M C Rodrigues
Jay Lucidarme
Ray Borrow
Andrew Smith
J Claire Cameron
E Richard Moxon
Martin C J Maiden
University of Oxford · GBGlasgow Royal Infirmary · GBHealth Protection Scotland · GBPublic Health England · GBUniversity of Glasgow · GB

Funding

Wellcome TrustWellcome Trust 087622Wellcome Trust 104992Wellcome Trust 109031/Z15/Z
6 · The paper itself

Abstract

In September 2015, 4CMenB meningococcal vaccine was introduced into the United Kingdom infant immunization program without phase 3 trial information. Understanding the effect of this program requires enhanced surveillance of invasive meningococcal disease (IMD) Neisseria meningitidis isolates and comparison with prevaccination isolates. Bexsero Antigen Sequence Types (BASTs) were used to analyze whole-genome sequences of 3,073 prevaccine IMD N. meningitidis isolates obtained during 2010-2016. Isolates exhibited 803 BASTs among 31 clonal complexes. Frequencies of antigen peptide variants were factor H binding protein 1, 13.4%; Neisserial heparin-binding antigen 2, 13.8%; Neisseria adhesin A 8, 0.8%; and Porin A-VR2:P1.4,10.9%. In 2015-16, serogroup B isolates showed the highest proportion (35.7%) of exact matches to >1 Bexsero components. Serogroup W isolates showed the highest proportion (93.9%) of putatively cross-reactive variants of Bexsero antigens. Results highlighted the likely role of cross-reactive antigens. BAST surveillance of meningococcal whole-genome sequence data is rapid, scalable, and portable and enables international comparisons of isolates.

Indexed as

Genome, BacterialAntigenic VariationAntigens, BacterialGenomicsHistory, 21st CenturyHumansImmunogenicity, VaccineMeningitis, MeningococcalMeningococcal VaccinesMultilocus Sequence TypingNeisseria meningitidisPeptidesPopulation SurveillanceUnited Kingdom4CMenB vaccineAntigens, BacterialMeningococcal VaccinesPeptides4CMenBbacteriaBexseroepidemiologic yeargenomic surveillanceIMDinvasive meningococcal diseasemeningitis/encephalitismeningococcal vaccinesmeningococciMLSTmolecular epidemiologymultilocus sequence typingNeisseria meningitidisUnited Kingdomvaccine antigenic variantsvaccineswhole-genome sequencing

Identifiers

PMID29553330
PMCPMC5875271
OpenAlexW2791716523

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.