Evidence map›Paper›PMID 29553248›Full record

ArticleACS chemical biology2018

A High Content Screen in Macrophages Identifies Small Molecule Modulators of STING-IRF3 and NFkB Signaling.

Peter D Koch, Howard R Miller, Gary Yu, John A Tallarico, Peter K Sorger, Yuan Wang, Yan Feng, Jason R Thomas, Nathan T Ross, Timothy Mitchison

Abstract read
In one paragraph

Article in ACS chemical biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Molecular Dynamics Simulations Reveal the Modulated Mechanism of STING Conformation.Interdisciplinary sciences, computational life sciences · 2021
    Article
  7. Review
  8. Article
  9. Article
  10. Review
  11. Article
  12. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Peter D KochDepartment of Systems Biology , Harvard Medical School , 200 Longwood Ave. , Boston , Massachusetts 02115 , United States.ORCID 0000-0001-8312-1657
Howard R MillerChemical Biology and Therapeutics , Novartis Institutes for Biomedical Research , 181 Massachusetts Ave. , Cambridge , Massachusetts 02139 , United States.
Gary YuChemical Biology and Therapeutics , Novartis Institutes for Biomedical Research , 181 Massachusetts Ave. , Cambridge , Massachusetts 02139 , United States.
John A TallaricoChemical Biology and Therapeutics , Novartis Institutes for Biomedical Research , 181 Massachusetts Ave. , Cambridge , Massachusetts 02139 , United States.
Peter K SorgerDepartment of Systems Biology , Harvard Medical School , 200 Longwood Ave. , Boston , Massachusetts 02115 , United States.
Yuan WangChemical Biology and Therapeutics , Novartis Institutes for Biomedical Research , 181 Massachusetts Ave. , Cambridge , Massachusetts 02139 , United States.
Yan FengChemical Biology and Therapeutics , Novartis Institutes for Biomedical Research , 181 Massachusetts Ave. , Cambridge , Massachusetts 02139 , United States.
Jason R ThomasChemical Biology and Therapeutics , Novartis Institutes for Biomedical Research , 181 Massachusetts Ave. , Cambridge , Massachusetts 02139 , United States.ORCID 0000-0001-7502-3600
Nathan T RossChemical Biology and Therapeutics , Novartis Institutes for Biomedical Research , 181 Massachusetts Ave. , Cambridge , Massachusetts 02139 , United States.
Timothy MitchisonDepartment of Systems Biology , Harvard Medical School , 200 Longwood Ave. , Boston , Massachusetts 02115 , United States.
Harvard University · US

Funding

Pharmaco Response Signatures and Disease MechanismU54HL127365 · NHLBI · HARVARD MEDICAL SCHOOL · PI SORGER, PETER KARL · 2014 to 2019
$13.1M
NHLBI NIH HHS U54 HL127365
6 · The paper itself

Abstract

We screened a library of bioactive small molecules for activators and inhibitors of innate immune signaling through IRF3 and NFkB pathways with the goals of advancing pathway understanding and discovering probes for immunology research. We used high content screening to measure the translocation from the cytoplasm to nucleus of IRF3 and NFkB in primary human macrophages; these transcription factors play a critical role in the activation of STING and other pro-inflammatory pathways. Our pathway activator screen yielded a diverse set of hits that promoted nuclear translocation of IRF3 and/or NFkB, but the majority of these compounds did not cause activation of downstream pathways. Screening for antagonists of the STING pathway yielded multiple kinase inhibitors, some of which inhibit kinases not previously known to regulate the activity of this pathway. Structure-activity relationships (SARs) and subsequent chemical proteomics experiments suggested that MAPKAPK5 (PRAK) is a kinase that regulates IRF3 translocation in human macrophages. Our work establishes a high content screening approach for measuring pro-inflammatory pathways in human macrophages and identifies novel ways to inhibit such pathways; among the targets of the screen are several molecules that may merit further development as anti-inflammatory drugs.

Indexed as

Active Transport, Cell NucleusDrug Evaluation, PreclinicalHumansInterferon Regulatory Factor-3Intracellular Signaling Peptides and ProteinsMacrophagesMembrane ProteinsNF-kappa BProtein Kinase InhibitorsProtein Serine-Threonine KinasesSignal TransductionSmall Molecule LibrariesSTING ProteinInterferon Regulatory Factor-3Intracellular Signaling Peptides and ProteinsIRF3 protein, humanMAP-kinase-activated kinase 5Membrane ProteinsNF-kappa BProtein Kinase InhibitorsProtein Serine-Threonine KinasesSmall Molecule LibrariesSTING1 protein, humanSTING Protein

Identifiers

PMID29553248
PMCPMC5996755
OpenAlexW2789446013

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.