Evidence map›Paper›PMID 29551290›Full record

ArticleStructure (London, England : 1993)2018

Structure of the Mitochondrial Aminolevulinic Acid Synthase, a Key Heme Biosynthetic Enzyme.

Breann L Brown, Julia R Kardon, Robert T Sauer, Tania A Baker

Abstract read
In one paragraph

Article in Structure (London, England : 1993), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. The yeast ALA synthase C-terminus positively controls enzyme structure and function.Protein science : a publication of the Protein Society · 2023
    Article
  7. Regulation of Heme Synthesis by Mitochondrial Homeostasis Proteins.Frontiers in cell and developmental biology · 2022
    Review
  8. Structural Basis for Allostery in PLP-dependent Enzymes.Frontiers in molecular biosciences · 2022
    Review
  9. Review
  10. Review
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Review
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Breann L BrownDepartment of Biology, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.
Julia R KardonDepartment of Biology, Massachusetts Institute of Technology, Cambridge, MA 02139, USA; Howard Hughes Medical Institute, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.
Robert T SauerDepartment of Biology, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.
Tania A BakerDepartment of Biology, Massachusetts Institute of Technology, Cambridge, MA 02139, USA; Howard Hughes Medical Institute, Massachusetts Institute of Technology, Cambridge, MA 02139, USA. Electronic address: tabaker@mit.edu.

Funding

Overall EvaluationP41GM103403 · NIGMS · CORNELL UNIVERSITY · PI EALICK, STEVEN E · 2012 to 2017
$14.3M
REPRESSOR &ANTIREPRESSOR PROTEINS OF BACTERIOPHAGER01AI016892 · NIAID · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI BAKER, TANIA A, SAUER, ROBERT T · 1985 to 2022
$13.0M
Protein Recognition for Remodeling and Degradation by Bacterial AAA+ ATPasesR01GM049224 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI BAKER, TANIA A · 1993 to 2013
$4.0M
Macromolecular interactions controlling the ALA synthases, keystone enzymes that initiate heme biosynthesisR01DK115558 · NIDDK · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI BAKER, TANIA A · 2017 to 2021
$2.1M
Regulation of Heme Synthesis and Mitochondrial Physiology by the ClpX UnfoldaseF32DK095726 · NIDDK · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI KARDON, JULIA R. · 2012 to 2014
$169k
Howard Hughes Medical InstituteNIAID NIH HHS R01 AI016892NIDDK NIH HHS F32 DK095726NIDDK NIH HHS R01 DK115558NIGMS NIH HHS P41 GM103403NIGMS NIH HHS R01 GM049224
6 · The paper itself

Abstract

5-Aminolevulinic acid synthase (ALAS) catalyzes the first step in heme biosynthesis. We present the crystal structure of a eukaryotic ALAS from Saccharomyces cerevisiae. In this homodimeric structure, one ALAS subunit contains covalently bound cofactor, pyridoxal 5'-phosphate (PLP), whereas the second is PLP free. Comparison between the subunits reveals PLP-coupled reordering of the active site and of additional regions to achieve the active conformation of the enzyme. The eukaryotic C-terminal extension, a region altered in multiple human disease alleles, wraps around the dimer and contacts active-site-proximal residues. Mutational analysis demonstrates that this C-terminal region that engages the active site is important for ALAS activity. Our discovery of structural elements that change conformation upon PLP binding and of direct contact between the C-terminal extension and the active site thus provides a structural basis for investigation of disruptions in the first step of heme biosynthesis and resulting human disorders.

Indexed as

5-Aminolevulinate SynthetaseAmino Acid MotifsAmino Acid SubstitutionAminolevulinic AcidCatalytic DomainCloning, MolecularCoenzymesCrystallography, X-RayEscherichia coliGene ExpressionGenetic VectorsHemeKineticsMitochondriaModels, MolecularMutation5-Aminolevulinate SynthetaseAminolevulinic AcidCoenzymesHemeProtein SubunitsPyridoxal PhosphateRecombinant ProteinsSaccharomyces cerevisiae ProteinsAAA+ unfoldaseClpXporphyriasideroblastic anemiaXLPPXLSAα-oxoamine family

Identifiers

PMID29551290
PMCPMC5894356

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.