Evidence map›Paper›PMID 29551069›Full record

ArticleJournal of the American Chemical Society2018

Photoswitching of DNA Hybridization Using a Molecular Motor.

Anouk S Lubbe, Qing Liu, Sanne J Smith, Jan Willem de Vries, Jos C M Kistemaker, Alex H de Vries, Ignacio Faustino, Zhuojun Meng, Wiktor Szymanski, Andreas Herrmann and 1 more

Abstract read
In one paragraph

Article in Journal of the American Chemical Society, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed.

  1. Dynamic Control of Nucleic Acids Self-Assembly and Expression Using Photoswitches.Chemistry (Weinheim an der Bergstrasse, Germany) · 2026
    Review
  2. Article
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  4. Review
  5. Article
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  14. Review
  15. Article
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  17. Chemically Driven Rotatory Molecular Machines.Angewandte Chemie (International ed. in English) · 2022
    Review
  18. Review
  19. Article
  20. Controlling rotary motion of molecular motors based on oxindole.Organic chemistry frontiers : an international journal of organic chemistry · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Anouk S LubbeStratingh Institute for Chemistry , University of Groningen , Nijenborgh 4 , 9747 AG Groningen , The Netherlands.
Qing LiuZernike Institute for Advanced Materials , University of Groningen , Nijenborgh 4 , 9747AG Groningen , The Netherlands.
Sanne J SmithZernike Institute for Advanced Materials , University of Groningen , Nijenborgh 4 , 9747AG Groningen , The Netherlands.
Jan Willem de VriesZernike Institute for Advanced Materials , University of Groningen , Nijenborgh 4 , 9747AG Groningen , The Netherlands.
Jos C M KistemakerStratingh Institute for Chemistry , University of Groningen , Nijenborgh 4 , 9747 AG Groningen , The Netherlands.
Alex H de VriesZernike Institute for Advanced Materials , University of Groningen , Nijenborgh 4 , 9747AG Groningen , The Netherlands.
Ignacio FaustinoGroningen Biomolecular Sciences and Biotechnology (GBB) Institute , University of Groningen , Nijenborgh 7 , 9747AG Groningen , The Netherlands.
Zhuojun MengGroningen Biomolecular Sciences and Biotechnology (GBB) Institute , University of Groningen , Nijenborgh 7 , 9747AG Groningen , The Netherlands.
Wiktor SzymanskiStratingh Institute for Chemistry , University of Groningen , Nijenborgh 4 , 9747 AG Groningen , The Netherlands.ORCID 0000-0002-9754-9248
Andreas HerrmannZernike Institute for Advanced Materials , University of Groningen , Nijenborgh 4 , 9747AG Groningen , The Netherlands.ORCID 0000-0002-8886-0894
Ben L FeringaStratingh Institute for Chemistry , University of Groningen , Nijenborgh 4 , 9747 AG Groningen , The Netherlands.ORCID 0000-0003-0588-8435

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Reversible control over the functionality of biological systems via external triggers may be used in future medicine to reduce the need for invasive procedures. Additionally, externally regulated biomacromolecules are now considered as particularly attractive tools in nanoscience and the design of smart materials, due to their highly programmable nature and complex functionality. Incorporation of photoswitches into biomolecules, such as peptides, antibiotics, and nucleic acids, has generated exciting results in the past few years. Molecular motors offer the potential for new and more precise methods of photoregulation, due to their multistate switching cycle, unidirectionality of rotation, and helicity inversion during the rotational steps. Aided by computational studies, we designed and synthesized a photoswitchable DNA hairpin, in which a molecular motor serves as the bridgehead unit. After it was determined that motor function was not affected by the rigid arms of the linker, solid-phase synthesis was employed to incorporate the motor into an 8-base-pair self-complementary DNA strand. With the photoswitchable bridgehead in place, hairpin formation was unimpaired, while the motor part of this advanced biohybrid system retains excellent photochemical properties. Rotation of the motor generates large changes in structure, and as a consequence the duplex stability of the oligonucleotide could be regulated by UV light irradiation. Additionally, Molecular Dynamics computations were employed to rationalize the observed behavior of the motor-DNA hybrid. The results presented herein establish molecular motors as powerful multistate switches for application in biological environments.

Indexed as

Molecular Dynamics SimulationQuantum TheoryAzo CompoundsDNAMolecular StructureNucleic Acid HybridizationPhotochemical ProcessesStereoisomerismUltraviolet RaysazobenzeneAzo CompoundsDNA

Identifiers

PMID29551069
PMCPMC5909178

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.