Evidence map›Paper›PMID 29549427›Full record

ArticleDevelopment genes and evolution2018

Analysis of hpf1 expression and function in early embryonic development of zebrafish.

Zhen Zhang, Hongwei Sun, Yu Chen, Tianqi Cao, Zhou Songyang, Junjiu Huang, Yan Huang

Abstract read
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In one paragraph

Article in Development genes and evolution, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.2field-weighted citation impact, top 49% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 4 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Zhen ZhangKey Laboratory of Gene Engineering of the Ministry of Education, Institute of Healthy Aging Research and State Key Laboratory of Biocontrol, SYSU-BCM Joint Research Center, School of Life Sciences, Sun Yat-sen University, Guangzhou, 510275, China.
Hongwei SunKey Laboratory of Gene Engineering of the Ministry of Education, Institute of Healthy Aging Research and State Key Laboratory of Biocontrol, SYSU-BCM Joint Research Center, School of Life Sciences, Sun Yat-sen University, Guangzhou, 510275, China.
Yu ChenKey Laboratory of Gene Engineering of the Ministry of Education, Institute of Healthy Aging Research and State Key Laboratory of Biocontrol, SYSU-BCM Joint Research Center, School of Life Sciences, Sun Yat-sen University, Guangzhou, 510275, China.
Tianqi CaoKey Laboratory of Gene Engineering of the Ministry of Education, Institute of Healthy Aging Research and State Key Laboratory of Biocontrol, SYSU-BCM Joint Research Center, School of Life Sciences, Sun Yat-sen University, Guangzhou, 510275, China.
Zhou SongyangKey Laboratory of Gene Engineering of the Ministry of Education, Institute of Healthy Aging Research and State Key Laboratory of Biocontrol, SYSU-BCM Joint Research Center, School of Life Sciences, Sun Yat-sen University, Guangzhou, 510275, China.
Junjiu HuangKey Laboratory of Gene Engineering of the Ministry of Education, Institute of Healthy Aging Research and State Key Laboratory of Biocontrol, SYSU-BCM Joint Research Center, School of Life Sciences, Sun Yat-sen University, Guangzhou, 510275, China.
Yan HuangKey Laboratory of Gene Engineering of the Ministry of Education, Institute of Healthy Aging Research and State Key Laboratory of Biocontrol, SYSU-BCM Joint Research Center, School of Life Sciences, Sun Yat-sen University, Guangzhou, 510275, China. Huangy336@mail.sysu.edu.cn.ORCID 0000-0001-5466-7714
Sun Yat-sen University · CN

Funding

Guangdong Science and Technology Department Planning Project 2015A020212010National Key R&D Program of China 2017YFC1001901 and 2017YFC1001600National Natural Science Foundation of China 31401223National Natural Science Foundation of China 81330055the Fundamental Research Funds for the Central Universities 161gpy30Zhujiang Program of Science and Technology Nova in Guangzhou 201710010042
6 · The paper itself

Abstract

About 70% of zebrafish (Danio rerio) genes are orthologues of the human's, which are of great interests, but still largely unknown for their functions. Recently, a report on human histone PARylation factor 1 (HPF1/C4orf27) showed that it is involved in DNA damage response along with poly (ADP-ribose) polymerase 1 (PARP1). However, its function in living organism remains unclear. Given that zebrafish has showed its values in modeling human diseases and physiology, we characterized a zebrafish homolog of human HPF1 by sequence alignment. We also analyzed its expression pattern during early development and among adult tissues. Furthermore, knocking down hpf1 by morpholinos affected zebrafish early development. Our work provides a novel clue for the mechanism of genome stability and early embryogenesis.

Indexed as

Gene Expression Regulation, DevelopmentalModels, AnimalAmino Acid SequenceAnimalsAnimals, Genetically ModifiedCarrier ProteinsEmbryonic DevelopmentEmbryo, NonmammalianHumansNuclear ProteinsPoly (ADP-Ribose) Polymerase-1Sequence AlignmentZebrafishCarrier ProteinsHPF1 protein, humanNuclear ProteinsPARP1 protein, humanPoly (ADP-Ribose) Polymerase-1C4orf27/Hpf1In situ hybridizationMorpholinoRT-PCRZebrafish

Identifiers

PMID29549427
OpenAlexW2790298049

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.