Evidence map›Paper›PMID 29542091›Full record

ArticleJournal of molecular neuroscience : MN2018

The Regulation of Monoamine Oxidase A Gene Expression by Distinct Variable Number Tandem Repeats.

Maurizio Manca, Veridiana Pessoa, Ana Illera Lopez, Patrick T Harrison, Fabio Miyajima, Helen Sharp, Andrew Pickles, Jonathan Hill, Chris Murgatroyd, Vivien J Bubb and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Journal of molecular neuroscience : MN, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed, 1 pooled it
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 1 synthesis or guideline pooled it, 28 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Review
  5. Article
  6. Review
  7. Article
  8. Variable number tandem repeats - Their emerging role in sickness and health.Experimental biology and medicine (Maywood, N.J.) · 2021
    Review
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Non-coding genetic variation shaping mental health.Current opinion in psychology · 2019
    Review
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 2 countries.

Maurizio MancaDepartment of Molecular and Clinical Pharmacology, Institute of Translational Medicine, University of Liverpool, Liverpool, L69 3BX, UK.
Veridiana PessoaDepartment of Molecular and Clinical Pharmacology, Institute of Translational Medicine, University of Liverpool, Liverpool, L69 3BX, UK.
Ana Illera LopezDepartment of Molecular and Clinical Pharmacology, Institute of Translational Medicine, University of Liverpool, Liverpool, L69 3BX, UK.
Patrick T HarrisonDepartment of Physiology, BioSciences Institute, University College Cork, Cork, Ireland.
Fabio MiyajimaDepartment of Molecular and Clinical Pharmacology, Institute of Translational Medicine, University of Liverpool, Liverpool, L69 3BX, UK.
Helen SharpInstitute of Psychology, Health and Society, University of Liverpool, Liverpool, UK.
Andrew PicklesKing's College London, MRC Social Genetic and Developmental Psychiatry Research Centre, Institute of Psychiatry, London, UK.
Jonathan HillSchool for Psychology and Clinical Language Sciences, University of Reading, Reading, UK.
Chris MurgatroydSchool of Healthcare Science, Manchester Metropolitan University, Manchester, UK.
Vivien J BubbDepartment of Molecular and Clinical Pharmacology, Institute of Translational Medicine, University of Liverpool, Liverpool, L69 3BX, UK.
John P QuinnDepartment of Molecular and Clinical Pharmacology, Institute of Translational Medicine, University of Liverpool, Liverpool, L69 3BX, UK. jquinn@liverpool.ac.uk.
University of Liverpool · GBKing's College London · GBManchester Metropolitan University · GBUniversity College Cork · IEUniversity of Reading · GB

Funding

Medical Research Council G0400577Medical Research Council G0900654UK Medical Research Council G0400577Wellcome TrustWellcome Trust Grant 109095/Z/15/Z
6 · The paper itself

Abstract

The monoamine oxidase A (MAOA) uVNTR (upstream variable number tandem repeat) is one of the most often cited examples of a gene by environment interaction (GxE) in relation to behavioral traits. However, MAOA possesses a second VNTR, 500 bp upstream of the uVNTR, which is termed d- or distal VNTR. Furthermore, genomic analysis indicates that there are a minimum of two transcriptional start sites (TSSs) for MAOA, one of which encompasses the uVNTR within the 5' untranslated region of one of the isoforms. Through expression analysis in semi-haploid HAP1 cell lines genetically engineered in order to knockout (KO) either the uVNTR, dVNTR, or both VNTRs, we assessed the effect of the two MAOA VNTRs, either alone or in combination, on gene expression directed from the different TSSs. Complementing our functional analysis, we determined the haplotype variation of these VNTRs in the general population. The expression of the two MAOA isoforms was differentially modulated by the two VNTRs located in the promoter region. The most extensively studied uVNTR, previously considered a positive regulator of the MAOA gene, did not modulate the expression of what it is considered the canonical isoform, while we found that the dVNTR positively regulated this isoform in our model. In contrast, both the uVNTR and the dVNTR were found to act as negative regulators of the second less abundant MAOA isoform. The haplotype analysis for these two VNTRs demonstrated a bias against the presence of one of the potential variants. The uVNTR and dVNTR differentially affect expression of distinct MAOA isoforms, and thus, their combined profiling offers new insights into gene-regulation, GxE interaction, and ultimately MAOA-driven behavior.

Indexed as

Minisatellite RepeatsCell Line, TumorChildHaplotypesHumansMonoamine OxidasePolymorphism, GeneticPromoter Regions, GeneticMonoamine Oxidasemonoamine oxidase A, humanGene expressionHaplotypeIsoformsMAOATranscriptionVNTR

Identifiers

PMID29542091
PMCPMC5874270
OpenAlexW2794340600

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.