Evidence map›Paper›PMID 29542021›Full record

ArticleCell stress & chaperones2018

Small heat shock protein speciation: novel non-canonical 44 kDa HspB5-related protein species in rat and human tissues.

Rainer Benndorf, Robert R Gilmont, Sahoko Hirano, Richard F Ransom, Peter R Jungblut, Martin Bommer, James E Goldman, Michael J Welsh

Open access · bronzeAbstract read
In one paragraph

Article in Cell stress & chaperones, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.1field-weighted citation impact, top 54% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 2 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Rainer BenndorfDepartment of Cell and Developmental Biology, University of Michigan Medical School, Ann Arbor, MI, USA. rbenndo@gmx.net.ORCID http://orcid.org/0000-0002-3510-9909
Robert R GilmontDepartment of Plastic and Reconstructive Surgery, University of Michigan Medical School, Ann Arbor, MI, USA.
Sahoko HiranoDepartment of Cell and Developmental Biology, University of Michigan Medical School, Ann Arbor, MI, USA.
Richard F RansomDepartment of Pharmacology, University of Michigan Medical School, Ann Arbor, MI, USA.
Peter R JungblutCore Facility Protein Analysis, Max-Planck-Institute for Infection Biology, Berlin, Germany.
Martin BommerMax-Delbrück-Centrum für Molekulare Medizin, Berlin, Germany.
James E GoldmanDepartment of Pathology and Cell Biology, Columbia University, New York, NY, USA.
Michael J WelshDepartment of Cell and Developmental Biology, University of Michigan Medical School, Ann Arbor, MI, USA.
University of Michigan · USColumbia University · USMax Delbrück Center · DEMax Planck Institute for Infection Biology · DE

Funding

Pulmonary Toxicology Facility CoreP30ES005605 · NIEHS · UNIVERSITY OF IOWA · PI Brandi Janssen · 1990 to 2026
$40.5M
NIEHS NIH HHS P30 ES005605
6 · The paper itself

Abstract

When analyzing small stress proteins of rat and human tissues by electrophoretic methods followed by western blotting, and using the anti-HspB1/anti-HspB5 antibody clone 8A7, we unexpectedly found a protein with a molecular mass of ~44 kDa. On two-dimensional gels, this protein resolved into four distinct species. Electrophoretic and immunological evidence suggests that this 44 kDa protein is a derivative of HspB5, most likely a covalently linked HspB5 dimer. This HspB5-like 44 kDa protein (HspB5L-P44) is particularly abundant in rat heart, brain, and renal cortex and glomeruli. HspB5L-P44 was also found in human brains, including those from patients with Alexander disease, a condition distinguished by cerebral accumulation of HspB5. Gray matter of such a patient contained an elevated amount of HspB5L-P44. A spatial model of structurally ordered dimeric HspB5 α-crystallin domains reveals the exposed and adjacent position of the two peptide segments homologous to the HspB1-derived 8A7 antigen determinant peptide (epitope). This explains the observed extraordinary high avidity of the 8A7 antibody towards HspB5L-P44, as opposed to commonly used HspB5-specific antibodies which recognize other epitopes. This scenario also explains the remarkable fact that no previous study reported the existence of HspB5L-P44 species. Exposure of rat endothelial cells to UV light, an oxidative stress condition, temporarily increased HspB5L-P44, suggesting physiological regulation of the dimerization. The existence of HspB5L-P44 supports the protein speciation discourse and fits to the concept of the protein code, according to which the expression of a given gene is reflected only by the complete set of the derived protein species.

Indexed as

alpha-Crystallin B ChainAnimalsBrainCells, CulturedChildChild, PreschoolCrystallinsElectrophoresis, Gel, Two-DimensionalEndothelial CellsEpitopesFemaleHeat-Shock Proteins, SmallHumansMaleMicrotubule-Associated ProteinsOxidative Stressalpha-Crystallin B ChainCRYAB protein, humancryaB protein, ratCrystallinsEpitopesHeat-Shock Proteins, SmallMicrotubule-Associated ProteinsCovalently bonded HspB5 dimersHspB1-/HspB5-specific antibody clone 8A7MammalsProtein modificationProtein speciation

Identifiers

PMID29542021
PMCPMC6111085
OpenAlexW2789479263

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.