Evidence map›Paper›PMID 29540481›Full record

ArticleThe Journal of biological chemistry2018

Energetics underlying hemin extraction from human hemoglobin by

Megan Sjodt, Ramsay Macdonald, Joanna D Marshall, Joseph Clayton, John S Olson, Martin Phillips, David A Gell, Jeff Wereszczynski, Robert T Clubb

Erratum issuedOpen access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 23 citations in OpenAlex.

  1. Cryo-EM provides insight into how thebioRxiv : the preprint server for biology · 2026
    Article
  2. Hemoglobin receptor redundancy inJournal of structural biology: X · 2025
    Article
  3. Molecular basis of hemoglobin binding and heme removal inProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  4. The Shr receptor fromProceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  5. Article
  6. Article
  7. Article
  8. Cryo-EM structures of staphylococcal IsdB bound to human hemoglobin reveal the process of heme extraction.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
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  17. TheThe Journal of biological chemistry · 2018
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 2 countries.

Megan SjodtFrom the Department of Chemistry and Biochemistry.
Ramsay MacdonaldFrom the Department of Chemistry and Biochemistry.
Joanna D MarshallFrom the Department of Chemistry and Biochemistry.
Joseph Claytonthe Department of Physics and Center for Molecular Study of Condensed Soft Matter, Illinois Institute of Technology, Chicago, Illinois 60616.
John S Olsonthe Department of BioSciences, Rice University, Houston, Texas 77251, and.
Martin PhillipsFrom the Department of Chemistry and Biochemistry.
David A Gellthe School of Medicine, University of Tasmania, Hobart, Tasmania 7000, Australia.
Jeff Wereszczynskithe Department of Physics and Center for Molecular Study of Condensed Soft Matter, Illinois Institute of Technology, Chicago, Illinois 60616.
Robert T ClubbFrom the Department of Chemistry and Biochemistry, rclubb@mbi.ucla.edu.
University of California, Los Angeles · USDigital Proteomics (United States) · USIllinois Institute of Technology · USRice University · USUniversity of Tasmania · AU

Funding

Recombinant HbAp Production for In Vivo Toxicity StudiesP01HL110900 · NHLBI · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI NACHARAJU, PARIMALA · 2012 to 2016
$10.6M
Cell Surface Protein Anchoring in Gram-Positive BacteriaR01AI052217 · NIAID · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI Robert Thompson Clubb · 2002 to 2026
$8.5M
Probing the Structure/Function/Dynamics Relationship in Biomolecular Complexes With Multiscale Computational TechniquesR35GM119647 · NIGMS · ILLINOIS INSTITUTE OF TECHNOLOGY · PI WERESZCZYNSKI, JEFFERY · 2016 to 2025
$3.8M
Bruker Avance III Console and QCI Cryoprobe for a 600 MHz NMR SpectrometerS10OD016336 · OD · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI CLUBB, ROBERT THOMPSON · 2014 to 2014
$600k
BRUKER 800 MHZ TCI CRYOPROBE: STRUCTURES AND DYNAMICS OF PROTEINSS10RR022471 · NCRR · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI CLUBB, ROBERT THOMPSON · 2006 to 2006
$301k
Hemoglobin Capture and Heme Acquisition by the Pathogen Staphylococcus AureusF31GM101931 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI SJODT, MEGAN MARIE · 2012 to 2016
$158k
ITC: Isothermal Titration CalorimeterS10OD011994 · OD · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI CLUBB, ROBERT THOMPSON · 2012 to 2012
$136k
NCRR NIH HHS S10 RR022471NHLBI NIH HHS P01 HL110900NIAID NIH HHS R01 AI052217NIGMS NIH HHS F31 GM101931NIGMS NIH HHS R35 GM119647NIH HHS S10 OD011994NIH HHS S10 OD016336
6 · The paper itself

Abstract

PubMed holds no abstract for this paper.

Indexed as

Energy MetabolismAntigens, BacterialBinding SitesBiopolymersCalorimetryCation Transport ProteinsHeminHemoglobinsHumansHydrolysisKineticsMolecular Dynamics SimulationNuclear Magnetic Resonance, BiomolecularProtein BindingProtein ConformationReceptors, Cell SurfaceAntigens, BacterialBiopolymersCation Transport ProteinsHeminHemoglobinsIsdB protein, Staphylococcus aureusIsdH protein, Staphylococcus aureusReceptors, Cell Surfacebacterial pathogenesishemoglobiniron-regulated surface determinant systemIsdBIsdHisothermal titration calorimetry (ITC)molecular dynamicsNEAT domainreceptorstopped-flow spectrophotometry

Identifiers

PMID29540481
PMCPMC5936817
OpenAlexW2793384463

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.