Evidence map›Paper›PMID 29536945›Full record

ArticlePhysics in medicine and biology2018

Learning-based stochastic object models for characterizing anatomical variations.

Steven R Dolly, Yang Lou, Mark A Anastasio, Hua Li

Abstract read
In one paragraph

Article in Physics in medicine and biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Steven R DollyDepartment of Radiation Oncology, Washington University in St. Louis, St. Louis, MO, United States of America.
Yang LouDepartment of Biomedical Engineering, Washington University in St. Louis, St. Louis, MO, United States of America.
Mark A AnastasioDepartment of Radiation Oncology, Washington University in St. Louis, St. Louis, MO, United States of America.ORCID 0000-0002-3192-4172
Hua LiDepartment of Radiation Oncology, Washington University in St. Louis, St. Louis, MO, United States of America.ORCID 0000-0002-5629-2247

Funding

Safe, rapid & functional pediatric brain imaging using photoacoustic computed tomographyR01NS102213 · NINDS · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI ANASTASIO, MARK A, WANG, LIHONG · 2017 to 2021
$3.0M
AN ENABLING TECHNOLOGY FOR PRECLINICAL X-RAY IMAGING OF BIOMATERIALS IN-VIVOR01EB020604 · NIBIB · WASHINGTON UNIVERSITY · PI ANASTASIO, MARK A, BREY, ERIC M · 2016 to 2019
$2.3M
DEVELOPMENT OF A RAPID METHOD FOR IMAGING REGIONAL VENTILATION IN SMALL ANIMALS W/O CONTRAST AGENTSR01EB023045 · NIBIB · WASHINGTON UNIVERSITY · PI ANASTASIO, MARK A · 2017 to 2020
$1.7M
NIBIB NIH HHS R01 EB020604NIBIB NIH HHS R01 EB023045NINDS NIH HHS R01 NS102213
6 · The paper itself

Abstract

It is widely known that the optimization of imaging systems based on objective, task-based measures of image quality via computer-simulation requires the use of a stochastic object model (SOM). However, the development of computationally tractable SOMs that can accurately model the statistical variations in human anatomy within a specified ensemble of patients remains a challenging task. Previously reported numerical anatomic models lack the ability to accurately model inter-patient and inter-organ variations in human anatomy among a broad patient population, mainly because they are established on image data corresponding to a few of patients and individual anatomic organs. This may introduce phantom-specific bias into computer-simulation studies, where the study result is heavily dependent on which phantom is used. In certain applications, however, databases of high-quality volumetric images and organ contours are available that can facilitate this SOM development. In this work, a novel and tractable methodology for learning a SOM and generating numerical phantoms from a set of volumetric training images is developed. The proposed methodology learns geometric attribute distributions (GAD) of human anatomic organs from a broad patient population, which characterize both centroid relationships between neighboring organs and anatomic shape similarity of individual organs among patients. By randomly sampling the learned centroid and shape GADs with the constraints of the respective principal attribute variations learned from the training data, an ensemble of stochastic objects can be created. The randomness in organ shape and position reflects the learned variability of human anatomy. To demonstrate the methodology, a SOM of an adult male pelvis is computed and examples of corresponding numerical phantoms are created.

Indexed as

Models, AnatomicPhantoms, ImagingAdultAlgorithmsComputer SimulationHumansMalePelvic NeoplasmsRadiotherapy, Computer-AssistedRadiotherapy Planning, Computer-Assisted

Identifiers

PMID29536945
PMCPMC6535399

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.