Evidence map›Paper›PMID 29536659›Full record

ArticleMicrobiologyOpen2018

Transcriptional coupling (Mfd) and DNA damage scanning (DisA) coordinate excision repair events for efficient Bacillus subtilis spore outgrowth.

Luz I Valenzuela-García, Víctor M Ayala-García, Ana G Regalado-García, Peter Setlow, Mario Pedraza-Reyes

Open access · goldAbstract read
In one paragraph

Article in MicrobiologyOpen, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. International journal of molecular sciences · 2025
    Article
  3. Germination and Outgrowth ofMicroorganisms · 2025
    Article
  4. Review
  5. Article
  6. Bacterial cell volume regulation and the importance of cyclic di-AMP.Microbiology and molecular biology reviews : MMBR · 2024
    Review
  7. Microbiology and molecular biology reviews : MMBR · 2024
    Review
  8. Review
  9. Article
  10. Article
  11. Article
  12. Biology · 2021
    Article
  13. Article
  14. Article
  15. c-di-AMP assists osmoadaptation by regulating theThe Journal of biological chemistry · 2019
    Article
  16. Review
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Luz I Valenzuela-GarcíaDepartment of Biology, University of Guanajuato, Guanajuato, Mexico.
Víctor M Ayala-GarcíaDepartment of Biology, University of Guanajuato, Guanajuato, Mexico.
Ana G Regalado-GarcíaDepartment of Biology, University of Guanajuato, Guanajuato, Mexico.
Peter SetlowDepartment of Molecular Biology and Biophysics, UConn Health, Farmington, CT, USA.
Mario Pedraza-ReyesDepartment of Biology, University of Guanajuato, Guanajuato, Mexico.ORCID 0000-0001-5137-8108
Universidad de Guanajuato · MXUConn Health · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The absence of base excision repair (BER) proteins involved in processing ROS-promoted genetic insults activates a DNA damage scanning (DisA)-dependent checkpoint event in outgrowing Bacillus subtilis spores. Here, we report that genetic disabling of transcription-coupled repair (TCR) or nucleotide excision repair (NER) pathways severely affected outgrowth of ΔdisA spores, and much more so than the effects of these mutations on log phase growth. This defect delayed the first division of spore's nucleoid suggesting that unrepaired lesions affected transcription and/or replication during outgrowth. Accordingly, return to life of spores deficient in DisA/Mfd or DisA/UvrA was severely affected by a ROS-inducer or a replication blocking agent, hydrogen peroxide and 4-nitroquinoline-oxide, respectively. Mutation frequencies to rifampin resistance (Rif

Indexed as

DNA DamageDNA RepairAnti-Bacterial AgentsBacillus subtilisBacterial ProteinsDNA-Directed RNA PolymerasesDNA ReplicationDrug Resistance, BacterialMutationReactive Oxygen SpeciesRifampinSporesTranscription FactorsTranscription, GeneticAnti-Bacterial AgentsBacterial ProteinsDNA-Directed RNA PolymerasesReactive Oxygen SpeciesRifampinRNA polymerase beta subunitTranscription Factorstranscription repair coupling factor protein, BacteriaBacillus subtilisDisAgermination/outgrowthNERTCR

Identifiers

PMID29536659
PMCPMC6182552
OpenAlexW2793837200

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.